| CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database BP Alcock, AR Raphenya, TTY Lau, KK Tsang, M Bouchard, ... Nucleic acids research 48 (D1), D517-D525, 2020 | 2614 | 2020 |
| CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database B Jia, AR Raphenya, B Alcock, N Waglechner, P Guo, KK Tsang, BA Lago, ... Nucleic acids research, gkw1004, 2016 | 2184 | 2016 |
| CARD 2023: expanded curation, support for machine learning, and resistome prediction at the Comprehensive Antibiotic Resistance Database BP Alcock, W Huynh, R Chalil, KW Smith, AR Raphenya, MA Wlodarski, ... Nucleic acids research 51 (D1), D690-D699, 2023 | 390 | 2023 |
| Metformin-induced increases in GDF15 are important for suppressing appetite and promoting weight loss EA Day, RJ Ford, BK Smith, P Mohammadi-Shemirani, MR Morrow, ... Nature Metabolism 1 (12), 1202-1208, 2019 | 224 | 2019 |
| Isolation, sequence, infectivity, and replication kinetics of severe acute respiratory syndrome coronavirus 2 A Banerjee, JA Nasir, P Budylowski, L Yip, P Aftanas, N Christie, ... Emerging infectious diseases 26 (9), 2054, 2020 | 128 | 2020 |
| Failed recovery of glycemic control and myofibrillar protein synthesis with 2 wk of physical inactivity in overweight, prediabetic older adults C McGlory, MT von Allmen, T Stokes, RW Morton, AJ Hector, BA Lago, ... The Journals of Gerontology: Series A 73 (8), 1070-1077, 2018 | 106 | 2018 |
| A comparison of whole genome sequencing of SARS-CoV-2 using amplicon-based sequencing, random hexamers, and bait capture JA Nasir, RA Kozak, P Aftanas, AR Raphenya, KM Smith, F Maguire, ... Viruses 12 (8), 895, 2020 | 97 | 2020 |
| Capturing the resistome: a targeted capture method to reveal antibiotic resistance determinants in metagenomes AK Guitor, AR Raphenya, J Klunk, M Kuch, B Alcock, MG Surette, ... Antimicrobial agents and chemotherapy 64 (1), 10.1128/aac. 01324-19, 2019 | 80 | 2019 |
| The pesticide chlorpyrifos promotes obesity by inhibiting diet-induced thermogenesis in brown adipose tissue B Wang, EE Tsakiridis, S Zhang, A Llanos, EM Desjardins, JM Yabut, ... Nature communications 12 (1), 5163, 2021 | 64 | 2021 |
| The transcription factor, Nuclear factor, erythroid 2 (Nfe2), is a regulator of the oxidative stress response during Danio rerio development LM Williams, BA Lago, AG McArthur, AR Raphenya, N Pray, N Saleem, ... Aquatic toxicology 180, 141-154, 2016 | 34 | 2016 |
| Metformin-induced reductions in tumor growth involves modulation of the gut microbiome LA Broadfield, A Saigal, JC Szamosi, JA Hammill, K Bezverbnaya, ... Molecular Metabolism 61, 101498, 2022 | 26 | 2022 |
| The origins and genomic diversity of American Civil War Era smallpox vaccine strains AT Duggan, J Klunk, AF Porter, AN Dhody, R Hicks, GL Smith, ... Genome biology 21, 1-11, 2020 | 25 | 2020 |
| Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package EJ Griffiths, RE Timme, CI Mendes, AJ Page, NF Alikhan, D Fornika, ... GigaScience 11, giac003, 2022 | 24 | 2022 |
| Capturing the antibiotic resistome of preterm infants reveals new benefits of probiotic supplementation AK Guitor, EI Yousuf, AR Raphenya, EK Hutton, KM Morrison, ... Microbiome 10 (1), 136, 2022 | 20 | 2022 |
| Enabling genomic island prediction and comparison in multiple genomes to investigate bacterial evolution and outbreaks C Bertelli, KL Gray, N Woods, AC Lim, KE Tilley, GL Winsor, GR Hoad, ... Microbial genomics 8 (5), 000818, 2022 | 20 | 2022 |
| The PHA4GE SARS-CoV-2 contextual data specification for open genomic epidemiology EJ Griffiths, RE Timme, AJ Page, N Alikhan, D Fornika, F Maguire, ... | 14 | 2020 |
| Genetic population structure of the round whitefish (Prosopium cylindraceum) in North America: multiple markers reveal glacial refugia and regional subdivision TD Morgan, CF Graham, AG McArthur, AR Raphenya, DR Boreham, ... Canadian Journal of Fisheries and Aquatic Sciences 75 (6), 836-849, 2018 | 14 | 2018 |
| Exploring the mobilome and resistome of Enterococcus faecium in a One Health context across two continents H Sanderson, KL Gray, A Manuele, F Maguire, A Khan, C Liu, ... Microbial genomics 8 (9), 000880, 2022 | 12 | 2022 |
| Functional relatedness in the Inv/Mxi‐Spa type III secretion system family JA Klein, BM Dave, AR Raphenya, AG McArthur, LA Knodler Molecular microbiology 103 (6), 973-991, 2017 | 12 | 2017 |
| Performance characteristics of next-generation sequencing for the detection of antimicrobial resistance determinants in Escherichia coli genomes and metagenomes AM Rooney, AR Raphenya, RG Melano, C Seah, NR Yee, ... MSystems 7 (3), e00022-22, 2022 | 10 | 2022 |
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