| The Virtual Metabolic Human database: integrating human and gut microbiome metabolism with nutrition and disease A Noronha, J Modamio, Y Jarosz, E Guerard, N Sompairac, G Preciat, ... Nucleic acids research 47 (D1), D614-D624, 2019 | 314 | 2019 |
| PredictProtein-predicting protein structure and function for 29 years M Bernhofer, C Dallago, T Karl, V Satagopam, M Heinzinger, M Littmann, ... Nucleic acids research 49 (W1), W535-W540, 2021 | 176 | 2021 |
| Quantifying ChIP-seq data: a spiking method providing an internal reference for sample-to-sample normalization N Bonhoure, G Bounova, D Bernasconi, V Praz, F Lammers, D Canella, ... Genome research 24 (7), 1157-1168, 2014 | 156 | 2014 |
| The Bgee suite: integrated curated expression atlas and comparative transcriptomics in animals FB Bastian, J Roux, A Niknejad, A Comte, SS Fonseca Costa, ... Nucleic acids research 49 (D1), D831-D847, 2021 | 138 | 2021 |
| IMP: a pipeline for reproducible reference-independent integrated metagenomic and metatranscriptomic analyses S Narayanasamy, Y Jarosz, EEL Muller, A Heintz-Buschart, M Herold, ... Genome biology 17, 1-21, 2016 | 131 | 2016 |
| HTSstation: a web application and open-access libraries for high-throughput sequencing data analysis FPA David, J Delafontaine, S Carat, FJ Ross, G Lefebvre, Y Jarosz, ... PloS one 9 (1), e85879, 2014 | 100 | 2014 |
| A multiplicity of factors contributes to selective RNA polymerase III occupancy of a subset of RNA polymerase III genes in mouse liver D Canella, D Bernasconi, F Gilardi, G LeMartelot, E Migliavacca, V Praz, ... Genome research 22 (4), 666-680, 2012 | 65 | 2012 |
| DAISY: A Data Information System for accountability under the General Data Protection Regulation R Becker, P Alper, V Grouès, S Munoz, Y Jarosz, J Lebioda, K Rege, ... GigaScience 8 (12), giz140, 2019 | 9 | 2019 |
| Danıelsdó ttir A Noronha, J Modamio, Y Jarosz, E Guerard, N Sompairac, G Preciat AD, Krecke, M., Merten, D., Haraldsdó ttir, HS, et al, 614-624, 2019 | 9 | 2019 |
| Provenance-enabled stewardship of human data in the GDPR Era P Alper, R Becker, V Satagopam, C Trefois, V Grouès, J Lebioda, ... International Provenance and Annotation Workshop, 266-269, 2018 | 3 | 2018 |
| Education as Risk Factor of Mild Cognitive Impairment: The Link to the Gut Microbiome M Klee, VTE Aho, P May, A Heintz-Buschart, Z Landoulsi, SR Jónsdóttir, ... The Journal of Prevention of Alzheimer's Disease, 1-10, 2024 | 1 | 2024 |
| A versatile and interoperable computational framework for the analysis and modeling of COVID-19 disease mechanisms A Niarakis, M Ostaszewski, A Mazein, I Kuperstein, M Kutmon, ... bioRxiv, 2022.12. 17.520865, 2022 | 1 | 2022 |
| Drug-target identification in COVID-19 disease mechanisms using computational systems biology approaches A Niarakis, M Ostaszewski, A Mazein, I Kuperstein, M Kutmon, ... Frontiers in Immunology 14, 1282859, 2024 | | 2024 |
| RDM Services at the Luxembourg National Data Service W Gu, C Trefois, P Alper, D Welter, Y Jarosz, J Lebioda, L Ebermann, ... Proceedings of the Conference on Research Data Infrastructure 1, 2023 | | 2023 |
| A versatile and interoperable computational framework for the analysis and modeling of COVID-19 disease mechanisms (preprint) A Niarakis, M Ostaszewski, A Mazein, I Kuperstein, ME Gillespie, ... | | 2022 |
| Provenance-Enabled Stewardship of Human Data in the GDPR Era V Groues, J Lebioda, Y Jarosz Provenance and Annotation of Data and Processes: 7th International …, 2018 | | 2018 |
| Microbiome-derived Multi-omicBiomarkers for Early-stage Detection and Stratification of Parkinson's Disease JP Trezzi, A Heintz, E Muller, S Narayanasamy, Y Jarosz, M Herold, ... | | 2018 |
| Comparative integrated omics: identification of key functionalities in microbial community-wide metabolic networks Y Jarosz, M Herold, A Kaysen, N Pinel, H Roume, A Heintz-Buschart, ... npj Biofilms and Microbiomes 1 (1), 2015 | | 2015 |
| Reproducible Research Results R3 C Trefois, Y Jarosz, W Gu, V Satagopam, S Coronado, R Schneider 9th Benelux Bioinformatics Conference, 2014 | | 2014 |
| Bgee integrates F Bastian, A Comte, W Gharib, MG Porta, Y Jarosz, B Laurenczy, S Moretti, ... | | |
