| Reliable tumor detection by whole-genome methylation sequencing of cell-free DNA in cerebrospinal fluid of pediatric medulloblastoma J Li, S Zhao, M Lee, Y Yin, J Li, Y Zhou, LY Ballester, Y Esquenazi, ... Science advances 6 (42), eabb5427, 2020 | 68 | 2020 |
| The lncRNA H19 alleviates muscular dystrophy by stabilizing dystrophin Y Zhang, Y Li, Q Hu, Y Xi, Z Xing, Z Zhang, L Huang, J Wu, K Liang, ... Nature cell biology 22 (11), 1332-1345, 2020 | 63 | 2020 |
| Activity-dependent aberrations in gene expression and alternative splicing in a mouse model of Rett syndrome S Osenberg, A Karten, J Sun, J Li, S Charkowick, CA Felice, M Kritzer, ... Proceedings of the National Academy of Sciences 115 (23), E5363-E5372, 2018 | 51 | 2018 |
| ASXL1 interacts with the cohesin complex to maintain chromatid separation and gene expression for normal hematopoiesis Z Li, P Zhang, A Yan, Z Guo, Y Ban, J Li, S Chen, H Yang, Y He, J Li, ... Science advances 3 (1), e1601602, 2017 | 49 | 2017 |
| Cytoplasmic Drosha activity generated by alternative splicing L Dai, K Chen, B Youngren, J Kulina, A Yang, Z Guo, J Li, P Yu, S Gu Nucleic acids research 44 (21), 10454-10466, 2016 | 46 | 2016 |
| A simple computer vision pipeline reveals the effects of isolation on social interaction dynamics in Drosophila G Liu, T Nath, GA Linneweber, A Claeys, Z Guo, J Li, M Bengochea, ... PLoS computational biology 14 (8), e1006410, 2018 | 36 | 2018 |
| Parameterized BLOSUM matrices for protein alignment D Song, J Chen, G Chen, N Li, J Li, J Fan, D Bu, SC Li IEEE/ACM Transactions on Computational Biology and Bioinformatics 12 (3 …, 2014 | 31 | 2014 |
| Genome-wide transcriptome analysis identifies alternative splicing regulatory network and key splicing factors in mouse and human psoriasis J Li, P Yu Scientific reports 8 (1), 1-11, 2018 | 27 | 2018 |
| Spatial organization of the mouse retina at single cell resolution by MERFISH J Choi, J Li, S Ferdous, Q Liang, JR Moffitt, R Chen nature communications 14 (1), 4929, 2023 | 25 | 2023 |
| CELF1 contributes to aberrant alternative splicing patterns in the type 1 diabetic heart KA Belanger, CA Nutter, J Li, S Tasnim, P Liu, P Yu, ... Biochemical and biophysical research communications 503 (4), 3205-3211, 2018 | 19 | 2018 |
| Cstf2t Regulates expression of histones and histone‐like proteins in male germ cells PN Grozdanov, J Li, P Yu, W Yan, CC MacDonald Andrology 6 (4), 605-615, 2018 | 17 | 2018 |
| A data mining paradigm for identifying key factors in biological processes using gene expression data J Li, L Zheng, A Uchiyama, L Bin, TM Mauro, PM Elias, T Pawelczyk, ... Scientific reports 8 (1), 1-9, 2018 | 17 | 2018 |
| GEOMetaCuration: a web-based application for accurate manual curation of Gene Expression Omnibus metadata Z Li, J Li, P Yu Database 2018, 2018 | 17 | 2018 |
| A developmentally regulated spliced variant of PTBP1 is upregulated in type 1 diabetic hearts KA Belanger, CA Nutter, J Li, P Yu, MN Kuyumcu-Martinez Biochemical and biophysical research communications 509 (2), 384-389, 2019 | 16 | 2019 |
| l1kdeconv: an R package for peak calling analysis with LINCS L1000 data Z Li, J Li, P Yu BMC bioinformatics 18 (1), 1-7, 2017 | 13 | 2017 |
| SFMetaDB: a comprehensive annotation of mouse RNA splicing factor RNA-Seq datasets J Li, CS Tseng, A Federico, F Ivankovic, YS Huang, A Ciccodicola, ... Database 2017, 2017 | 13 | 2017 |
| Integrated multi-omics single cell atlas of the human retina J Li, J Wang, IL Ibarra, X Cheng, MD Luecken, J Lu, A Monavarfeshani, ... Research Square, 2023 | 11* | 2023 |
| Comparative ligandomics implicates secretogranin III as a disease‐restricted angiogenic factor in laser‐induced choroidal neovascularization L Ji, P Waduge, W Wan, H Tian, J Li, J Zhang, R Chen, W Li The FEBS Journal, 2022 | 10 | 2022 |
| Comprehensive single-cell atlas of the mouse retina J Li, J Choi, X Cheng, J Ma, S Pema, JR Sanes, G Mardon, BJ Frankfort, ... Iscience 27 (6), 2024 | 9 | 2024 |
| Integrated analysis of a compendium of RNA-Seq datasets for splicing factors P Yu, J Li, SP Deng, F Zhang, PN Grozdanov, EWM Chin, SD Martin, ... Scientific data 7 (1), 1-16, 2020 | 9 | 2020 |
