The immune epitope database (IEDB): 2018 update R Vita, S Mahajan, JA Overton, SK Dhanda, S Martini, JR Cantrell, ... Nucleic acids research 47 (D1), D339-D343, 2019 | 1653 | 2019 |
The Immune Epitope Database and Analysis Resource in Epitope Discovery and Synthetic Vaccine Design W Fleri, S Paul, SK Dhanda, S Mahajan, X Xu, B Peters, A Sette Frontiers in Immunology 8, 278, 2017 | 437 | 2017 |
IEDB-AR: immune epitope database-analysis resource in 2019 SK Dhanda, S Mahajan, S Paul, Z Yan, H Kim, MC Jespersen, V Jurtz, ... Nucleic Acids Research, gkz452, 2019 | 290 | 2019 |
A short survey on protein blocks AP Joseph, G Agarwal, S Mahajan, JC Gelly, LS Swapna, B Offmann, ... Biophysical reviews 2, 137-145, 2010 | 134 | 2010 |
Antibody specific B-cell epitope predictions: leveraging information from antibody-antigen protein complexes MC Jespersen, S Mahajan, B Peters, M Nielsen, P Marcatili Frontiers in immunology 10, 298, 2019 | 128 | 2019 |
NetTCR: sequence-based prediction of TCR binding to peptide-MHC complexes using convolutional neural networks VI Jurtz, LE Jessen, AK Bentzen, MC Jespersen, S Mahajan, R Vita, ... BioRxiv, 433706, 2018 | 93 | 2018 |
TCRMatch: predicting T-cell receptor specificity based on sequence similarity to previously characterized receptors WD Chronister, A Crinklaw, S Mahajan, R Vita, Z Koşaloğlu-Yalçın, Z Yan, ... Frontiers in immunology 12, 640725, 2021 | 91 | 2021 |
On the relationship between low-frequency normal modes and the large-scale conformational changes of proteins S Mahajan, YH Sanejouand Archives of biochemistry and biophysics 567, 59-65, 2015 | 87 | 2015 |
Structure - Function studies of HNF1A (MODY3) gene mutations in South Indian patients with monogenic diabetes K Balamurugan, L Bjørkhaug, S Mahajan, S Kanthimathi, PR Njølstad, ... Clinical Genetics, 2016 | 52 | 2016 |
Immunodominant T-cell epitopes from the SARS-CoV-2 spike antigen reveal robust pre-existing T-cell immunity in unexposed individuals S Mahajan, V Kode, K Bhojak, CM Magdalene, K Lee, M Manoharan, ... bioRxiv, 367375, 2020 | 49 | 2020 |
TCRpMHCmodels: Structural modelling of TCR-pMHC class I complexes KK Jensen, V Rantos, EC Jappe, TH Olsen, MC Jespersen, V Jurtz, ... Scientific reports 9 (1), 14530, 2019 | 49 | 2019 |
Epitope specific antibodies and T cell receptors in the immune epitope database S Mahajan, R Vita, D Shackelford, J Lane, V Schulten, L Zarebski, ... Frontiers in immunology 9, 2688, 2018 | 48 | 2018 |
Multiple Myeloma DREAM Challenge reveals epigenetic regulator PHF19 as marker of aggressive disease MJ Mason, C Schinke, CLP Eng, F Towfic, F Gruber, A Dervan, BS White, ... Leukemia 34 (7), 1866-1874, 2020 | 41 | 2020 |
Comparison of tertiary structures of proteins in protein-protein complexes with unbound forms suggests prevalence of allostery in signalling proteins LS Swapna, S Mahajan, AG De Brevern, N Srinivasan BMC structural biology 12 (1), 6, 2012 | 25 | 2012 |
Community assessment of the predictability of cancer protein and phosphoprotein levels from genomics and transcriptomics M Yang, F Petralia, Z Li, H Li, W Ma, X Song, S Kim, H Lee, H Yu, B Lee, ... Cell systems 11 (2), 186-195. e9, 2020 | 24 | 2020 |
Jumping between protein conformers using normal modes S Mahajan, YH Sanejouand Journal of Computational Chemistry, 2017 | 20 | 2017 |
Knowledge-based prediction of protein backbone conformation using a structural alphabet I Vetrivel, S Mahajan, M Tyagi, L Hoffmann, YH Sanejouand, N Srinivasan, ... PloS one 12 (11), e0186215, 2017 | 17 | 2017 |
Incoherent effect of Fe and Ni substitutions in the ferromagnetic-insulator La0. 6Bi0. 4MnO3+ δ AK Kundu, M Motin Seikh, A Srivastava, S Mahajan, R Chatterjee, ... Journal of Applied Physics 110 (7), 2011 | 14 | 2011 |
Benchmark datasets of immune receptor-epitope structural complexes S Mahajan, Z Yan, MC Jespersen, KK Jensen, P Marcatili, M Nielsen, ... BMC bioinformatics 20, 1-7, 2019 | 12 | 2019 |
Use of a structural alphabet to find compatible folds for amino acid sequences S Mahajan, AG de Brevern, YH Sanejouand, N Srinivasan, B Offmann Protein Science, 2014 | 12 | 2014 |