| Bioinformatics approaches for deciphering the epitranscriptome: recent progress and emerging topics L Liu, B Song, J Ma, Y Song, SY Zhang, Y Tang, X Wu, Z Wei, K Chen, ... Computational and structural biotechnology journal 18, 1587-1604, 2020 | 52 | 2020 |
| A brief review of RNA modification related database resources J Ma, L Zhang, S Chen, H Liu Methods 203, 342-353, 2022 | 17 | 2022 |
| m7GDisAI: N7-methylguanosine (m7G) sites and diseases associations inference based on heterogeneous network J Ma, L Zhang, J Chen, B Song, C Zang, H Liu BMC bioinformatics 22, 1-16, 2021 | 15 | 2021 |
| HN-CNN: A Heterogeneous Network Based on Convolutional Neural Network for m7 G Site Disease Association Prediction L Zhang, J Chen, J Ma, H Liu Frontiers in genetics 12, 655284, 2021 | 11 | 2021 |
| REW-ISA V2: A biclustering method fusing homologous information for analyzing and mining epi-transcriptome data L Zhang, S Chen, J Ma, Z Liu, H Liu Frontiers in Genetics 12, 654820, 2021 | 8 | 2021 |
| BRPCA: Bounded Robust Principal Component Analysis to Incorporate Similarity Network for N7-Methylguanosine(m7G) Site-Disease Association Prediction J Ma, L Zhang, S Li, H Liu IEEE/ACM Transactions on Computational Biology and Bioinformatics 19 (6 …, 2021 | 3 | 2021 |
| LRTCLS: low-rank tensor completion with Laplacian smoothing regularization for unveiling the post-transcriptional machinery of N6-methylation (m6A)-mediated … J Ma, H Liu, Y Mao, L Zhang Briefings in Bioinformatics 23 (5), bbac325, 2022 | 2 | 2022 |
| MeT-DB V2. 0: elucidating context-specific functions of N6-methyl-adenosine methyltranscriptome H Liu, J Ma, J Meng, L Zhang RNA Bioinformatics, 507-518, 2021 | 2 | 2021 |
| MULGA, a unified multi-view graph autoencoder-based approach for identifying drug–protein interaction and drug repositioning J Ma, C Li, Y Zhang, Z Wang, S Li, Y Guo, L Zhang, H Liu, X Gao, J Song Bioinformatics 39 (9), btad524, 2023 | | 2023 |
| SpBLRSR: Schatten p-norm Constrained Bounded Low-rank Subspace Recovery for Predicting N7-methylguanosine (m7G)-disease Associations J Ma, L Zhang, X Chen, H Liu Current Bioinformatics 17 (7), 657-668, 2022 | | 2022 |
