Comparison of high-throughput sequencing data compression tools I Numanagić, JK Bonfield, F Hach, J Voges, J Ostermann, C Alberti, ... nature methods 13 (12), 1005-1008, 2016 | 118 | 2016 |
A comparison of JEM and AV1 with HEVC: Coding tools, coding efficiency and complexity T Laude, YG Adhisantoso, J Voges, M Munderloh, J Ostermann 2018 Picture Coding Symposium (PCS), 36-40, 2018 | 40 | 2018 |
A comprehensive video codec comparison T Laude, YG Adhisantoso, J Voges, M Munderloh, J Ostermann APSIPA Transactions on Signal and Information Processing 8, e30, 2019 | 38 | 2019 |
CALQ: compression of quality values of aligned sequencing data J Voges, J Ostermann, M Hernaez Bioinformatics 34 (10), 1650-1658, 2018 | 25 | 2018 |
An introduction to MPEG-G, the new ISO standard for genomic information representation C Alberti, T Paridaens, J Voges, D Naro, JJ Ahmad, M Ravasi, D Renzi, ... bioRxiv, 426353, 2018 | 19 | 2018 |
An evaluation framework for lossy compression of genome sequencing quality values C Alberti, N Daniels, M Hernaez, J Voges, RL Goldfeder, ... 2016 Data Compression Conference (DCC), 221-230, 2016 | 18 | 2016 |
An introduction to mpeg-g: the first open iso/iec standard for the compression and exchange of genomic sequencing data J Voges, M Hernaez, M Mattavelli, J Ostermann Proceedings of the IEEE 109 (9), 1607-1622, 2021 | 14 | 2021 |
Predictive coding of aligned next-generation sequencing data J Voges, M Munderloh, J Ostermann 2016 Data Compression Conference (DCC), 241-250, 2016 | 11 | 2016 |
GABAC: an arithmetic coding solution for genomic data J Voges, T Paridaens, F Müntefering, LS Mainzer, B Bliss, M Yang, ... Bioinformatics 36 (7), 2275-2277, 2020 | 7 | 2020 |
AliCo: A new efficient representation for SAM files I Ochoa, H Li, F Baumgarte, C Hergenrother, J Voges, M Hernaez 2019 Data Compression Conference (DCC), 93-102, 2019 | 5 | 2019 |
A two-level scheme for quality score compression J Voges, A Fotouhi, J Ostermann, MO Külekci Journal of Computational Biology 25 (10), 1141-1151, 2018 | 4 | 2018 |
Lossy compression of quality scores in differential gene expression: A first assessment and impact analysis AA Hernandez-Lopez, J Voges, C Alberti, M Mattavelli, J Ostermann 2018 Data Compression Conference, 167-176, 2018 | 4 | 2018 |
Differential gene expression with lossy compression of quality scores in RNA-seq data AA Hernandez-Lopez, J Voges, C Alberti, M Mattavelli, J Ostermann 2017 Data Compression Conference (DCC), 444-444, 2017 | 3 | 2017 |
Genie: an MPEG-G conformant software to compress genomic data B Bliss, J Allen, S Baheti, MA Bockol, S Chandak, J Delgado, J Fostier, ... | 2 | 2018 |
Method for encoding and decoding of quality values of a data structure J Voges, J Ostermann US Patent 10,938,415, 2021 | 1 | 2021 |
Genie: the first open-source ISO/IEC encoder for genomic data F Müntefering, YG Adhisantoso, S Chandak, J Ostermann, M Hernaez, ... Communications Biology 7 (1), 553, 2024 | | 2024 |
Validation of the predictive value of BDNF-87 methylation for antidepressant treatment success in severely depressed patients—a randomized rater-blinded trial HB Maier, A Neyazi, GL Bundies, F Meyer-Bockenkamp, S Bleich, ... Trials 25 (1), 247, 2024 | | 2024 |
Cooperative Design of a Dashboard for Monitoring the P4D Cohort Study on Major Depression H Maharlou, N Bössel-Debbert, M Lucht, HB Maier, S Mücke, ... The Eurographics Association, 2024 | | 2024 |
Python Wrapper for Context-based Adaptive Binary Arithmetic Coding C Rohlfing, T Meyer, J Schneider, J Voges 2023 IEEE International Conference on Visual Communications and Image …, 2023 | | 2023 |
GVC: efficient random access compression for gene sequence variations YG Adhisantoso, J Voges, C Rohlfing, V Tunev, JR Ohm, J Ostermann BMC bioinformatics 24 (1), 121, 2023 | | 2023 |