Persistent polyfunctional chimeric antigen receptor T cells that target glypican 3 eliminate orthotopic hepatocellular carcinomas in mice D Li, N Li, YF Zhang, H Fu, M Feng, D Schneider, L Su, X Wu, J Zhou, ... Gastroenterology 158 (8), 2250-2265. e20, 2020 | 130 | 2020 |
Humanization of antibodies using a machine learning approach on large-scale repertoire data C Marks, AM Hummer, M Chin, CM Deane Bioinformatics 37 (22), 4041-4047, 2021 | 73 | 2021 |
Advances in computational structure-based antibody design AM Hummer*, B Abanades*, CM Deane Current Opinion in Structural Biology 74, 102379, 2022 | 55 | 2022 |
A mass‐spectrometry‐based approach to distinguish annular and specific lipid binding to membrane proteins JR Bolla, RA Corey, C Sahin, J Gault, A Hummer, JTS Hopper, DP Lane, ... Angewandte Chemie 132 (9), 3551-3556, 2020 | 41 | 2020 |
Investigating the volume and diversity of data needed for generalizable antibody-antigen∆∆ G prediction AM Hummer, C Schneider, L Chinery, CM Deane bioRxiv, 2023.05. 17.541222, 2023 | 14 | 2023 |
Designing stable humanized antibodies AM Hummer, CM Deane Nature Biomedical Engineering 8 (1), 3-4, 2024 | 3 | 2024 |
AntiFold: Improved antibody structure design using inverse folding MH Høie*, AM Hummer*, T Olsen, M Nielsen, C Deane NeurIPS 2023 Generative AI and Biology (GenBio) Workshop, 2023 | 3 | 2023 |
Baselining the Buzz. Trastuzumab-HER2 Affinity, and Beyond! L Chinery*, AM Hummer*, BB Mehta*, R Akbar, P Rawat, A Slabodkin, ... bioRxiv, 2024.03. 26.586756, 2024 | 1 | 2024 |
AntiFold: Improved antibody structure design using inverse folding AM Hummer*, MH Høie*, TH Olsen, M Nielsen, CM Deane NeurIPS 2023 Machine Learning in Structural Biology (MLSB) Workshop, 2023 | 1 | 2023 |
AntiFold: Improved antibody structure-based design using inverse folding MH Høie*, AM Hummer*, TH Olsen, B Aguilar-Sanjuan, M Nielsen, ... arXiv e-prints, arXiv: 2405.03370, 2024 | | 2024 |
PLAbDab-nano: a database of camelid and shark nanobodies from patents and literature GL Gordon, AL Greenshields-Watson, P Agarwal, A Wong, F Boyles, ... bioRxiv, 2024.07. 19.604232, 2024 | | 2024 |
Analysis of glypican 3-targeted chimeric antigen receptor T cells in hepatocellular carcinoma cell and mouse models D Li, N Li, Y Zhang, H Fu, Z Duan, A Hummer, H Yang, MB Torres, X Luo, ... Cancer Research 79 (13_Supplement), 2311-2311, 2019 | | 2019 |
Kernel-Based Evaluation of Conditional Biological Sequence Models P Glaser, S Paul, AM Hummer, C Deane, DS Marks, AN Amin Forty-first International Conference on Machine Learning, 0 | | |