A review of the mammalian unfolded protein response A Chakrabarti, AW Chen, JD Varner Biotechnology and bioengineering 108 (12), 2777-2793, 2011 | 572 | 2011 |
Menstrual cycle rhythmicity: metabolic patterns in healthy women CF Draper, K Duisters, B Weger, A Chakrabarti, AC Harms, L Brennan, ... Scientific reports 8 (1), 14568, 2018 | 222 | 2018 |
Towards kinetic modeling of genome‐scale metabolic networks without sacrificing stoichiometric, thermodynamic and physiological constraints A Chakrabarti, L Miskovic, KC Soh, V Hatzimanikatis Biotechnology journal 8 (9), 1043-1057, 2013 | 174 | 2013 |
Aging and sarcopenia associate with specific interactions between gut microbes, serum biomarkers and host physiology in rats J Siddharth, A Chakrabarti, A Pannerec, S Karaz, D Morin-Rivron, ... Aging (Albany NY) 9 (7), 1698, 2017 | 109 | 2017 |
The microbiota–gut–brain axis: pathways to better brain health. Perspectives on what we know, what we need to investigate and how to put knowledge into practice A Chakrabarti, L Geurts, L Hoyles, P Iozzo, AD Kraneveld, G La Fata, ... Cellular and Molecular Life Sciences 79 (2), 80, 2022 | 104 | 2022 |
Identification of metabolic engineering targets for the enhancement of 1, 4-butanediol production in recombinant E. coli using large-scale kinetic models S Andreozzi, A Chakrabarti, KC Soh, A Burgard, TH Yang, S Van Dien, ... Metabolic engineering 35, 148-159, 2016 | 95 | 2016 |
Physicochemical regulation of endothelial sprouting in a 3D microfluidic angiogenesis model SS Verbridge, A Chakrabarti, P DelNero, B Kwee, JD Varner, AD Stroock, ... Journal of biomedical materials research Part A 101 (10), 2948-2956, 2013 | 89 | 2013 |
Multiscale models of breast cancer progression A Chakrabarti, S Verbridge, AD Stroock, C Fischbach, JD Varner Annals of biomedical engineering 40, 2488-2500, 2012 | 57 | 2012 |
The SIB Swiss Institute of Bioinformatics’ resources: focus on curated databases SIB Swiss Institute of Bioinformatics Members Nucleic acids research 44 (D1), D27-D37, 2016 | 51 | 2016 |
Differential metabolism of medium-chain fatty acids in differentiated human-induced pluripotent stem cell-derived astrocytes S Sonnay, A Chakrabarti, J Thevenet, A Wiederkehr, N Christinat, ... Frontiers in physiology 10, 657, 2019 | 30 | 2019 |
Ensembles of signal transduction models using pareto optimal ensemble techniques (poets) SO Song, A Chakrabarti, JD Varner Biotechnology journal 5 (7), 768-780, 2010 | 29 | 2010 |
Population Heterogeneity in the Epithelial to Mesenchymal Transition Is Controlled by NFAT and Phosphorylated Sp1 JDVJB Russell Gould, David M. Bassen, Anirikh Chakrabarti PLOS Computational Biology 12, 2016 | 28 | 2016 |
Computational modeling and analysis of insulin induced eukaryotic translation initiation J Lequieu, A Chakrabarti, S Nayak, JD Varner PLoS computational biology 7 (11), e1002263, 2011 | 25 | 2011 |
Perspective: leveraging the gut microbiota to predict personalized responses to dietary, prebiotic, and probiotic interventions SM Gibbons, T Gurry, JW Lampe, A Chakrabarti, V Dam, A Everard, ... Advances in Nutrition 13 (5), 1450-1461, 2022 | 24 | 2022 |
Exploration of singular and synergistic effect of xylitol and erythritol on causative agents of dental caries S Kõljalg, I Smidt, A Chakrabarti, D Bosscher, R Mändar Scientific Reports 10 (1), 6297, 2020 | 21 | 2020 |
Integrative phenotyping of glycemic responders upon clinical weight loss using multi-omics A Valsesia, A Chakrabarti, J Hager, D Langin, WHM Saris, A Astrup, ... Scientific reports 10 (1), 9236, 2020 | 18 | 2020 |
Discovery and validation of temporal patterns involved in human brain ketometabolism in cerebral microdialysis fluids of traumatic brain injury patients M Eiden, N Christinat, A Chakrabarti, S Sonnay, JP Miroz, B Cuenoud, ... EBioMedicine 44, 607-617, 2019 | 18 | 2019 |
Transcriptomics-driven lipidomics (TDL) identifies the microbiome-regulated targets of ileal lipid metabolism A Chakrabarti, M Membrez, D Morin-Rivron, J Siddharth, CJ Chou, ... NPJ systems biology and applications 3 (1), 33, 2017 | 15 | 2017 |
Impact of multi-micronutrient supplementation on lipidemia of children and adolescents A Chakrabarti, M Eiden, D Morin-Rivron, N Christinat, JP Monteiro, ... Clinical nutrition 39 (7), 2211-2219, 2020 | 11 | 2020 |
Saccharomyces cerevisiae fermentation product improves robustness of equine gut microbiome upon stress E Ganda, A Chakrabarti, MI Sardi, M Tench, BK Kozlowicz, SA Norton, ... Frontiers in Veterinary Science 10, 1134092, 2023 | 6 | 2023 |