Images as drivers of progress in cardiac computational modelling P Lamata, R Casero, V Carapella, SA Niederer, MJ Bishop, JE Schneider, ... Progress in biophysics and molecular biology 115 (2-3), 198-212, 2014 | 75 | 2014 |
Three-dimensional histology: tools and application to quantitative assessment of cell-type distribution in rabbit heart RAB Burton, P Lee, R Casero, A Garny, U Siedlecka, JE Schneider, ... Europace 16 (suppl_4), iv86-iv95, 2014 | 35 | 2014 |
Transformation diffusion reconstruction of three-dimensional histology volumes from two-dimensional image stacks R Casero, U Siedlecka, ES Jones, L Gruscheski, M Gibb, JE Schneider, ... Medical image analysis 38, 184-204, 2017 | 27 | 2017 |
A novel explicit 2D+ t cyclic shape model applied to echocardiography R Casero, JA Noble International Conference on Medical Image Computing and Computer-Assisted …, 2008 | 14 | 2008 |
Cardiac valve annulus manual segmentation using computer assisted visual feedback in three-dimensional image data R Casero, RAB Burton, TA Quinn, C Bollensdorff, P Hales, JE Schneider, ... 2010 Annual International Conference of the IEEE Engineering in Medicine and …, 2010 | 10 | 2010 |
LAMA: Automated image analysis for developmental phenotyping of mouse embryos AMM Neil R. Horner, Shanmugasundaram Venkataraman, Ramón Casero, James M ... Development, 2021 | 9 | 2021 |
OSS watch national software survey 2008 RC Cañas OSS Watch ‚University of Oxford, 2009 | 6 | 2009 |
Towards high-resolution cardiac atlases: ventricular anatomy descriptors for a standardized reference frame R Casero, RAB Burton, TA Quinn, C Bollensdorff, P Hales, JE Schneider, ... Statistical Atlases and Computational Models of the Heart: First …, 2010 | 5 | 2010 |
Three-Dimensional Histological Reconstruction of the Heart Guided by Block-Face Imaging of Wax-Embedded Tissue U Siedlecka, R Casero, RAB Burton, C Afonso, C Bollensdorff, V Grau, ... 6th International Workshop on Cardiac Mechano-Electric Coupling and …, 2013 | 4 | 2013 |
Left ventricle functional analysis in 2D+ t contrast echocardiography within an atlas-based deformable template model framework R Casero Cañas Oxford University, UK, 2008 | 4 | 2008 |
Block-Face Imaging of Wax-Embedded Tissue as a Modality to Aid Three-Dimensional Histological Reconstruction of the Heart U Siedlecka, RC Canas, RAB Burton, C Afonso, C Bollensdorff, V Grau, ... 37th Congress of IUPS (Birmingham, UK) (2013) Proc 37th IUPS, PCD033, 2013 | 3 | 2013 |
DeepCytometer pipeline parameter files, Klf14 mouse white adipose tissue histology and hand-traced training contours R Casero, H Westerberg, NR Horner, M Yon, A Aberdeen, V Grau, R Cox, ... https://doi.org/10.5281/zenodo.5137433, 2021 | 2* | 2021 |
Serial histology and blockface images. Full mouse heart, 600 sections U Siedlecka, ES Jones, L Gruscheski, TA Quinn, P Kohl, R Casero Institute for Experimental Cardiovascular Medicine, University of Freiburg …, 2017 | 1 | 2017 |
3D histology reconstruction with external blockface reference. Full mouse heart, 600 sections R Casero, U Siedlecka, ES Jones, L Gruscheski, TA Quinn, P Kohl Institute for Experimental Cardiovascular Medicine, University of Freiburg …, 2017 | 1 | 2017 |
Cleft palate and minor metabolic disturbances in a mouse global Arl15 gene knockout. Y Bai, L Bentley, C Ma, N Naveenan, J Cleak, Y Wu, MM Simon, ... | | 2023 |
The type 2 diabetes gene RREB1 plays a role in high-fat diet induced adipogenesis in mice GZ Yu, L Bentley, NAJ Krentz, R Casero, Y Bai, KK Mattis, S Holliman, ... European Association for the Study of Diabetes Virtual Meeting, 123, 2021 | | 2021 |
Klf14 mouse white adipose tissue histology DeepZoom files and AIDA annotations for visualisation of DeepCytometer white adipocyte segmentations R Casero, H Westerberg, NR Horner, M Yon, A Aberdeen, V Grau, R Cox, ... https://doi.org/10.5281/zenodo.5149005, 2021 | | 2021 |
Phenotyping of Klf14 mouse white adipose tissue enabled by whole slide segmentation with deep neural networks R Casero, H Westerberg, NR Horner, M Yon, A Aberdeen, V Grau, ... bioRxiv, 2021 | | 2021 |
Cytometer: Computerised segmentation of white adipocytes in full size H&E histology images using convolutional neural networks R Casero, H Westerberg, L Bentley, A Aberdeen, V Grau, R Cox, ... 33rd International Mammalian Genome Conference. Strasbourg, France. 25-28 …, 2019 | | 2019 |
Multicamera cloud detection and tracking R Casero Cañas, DW Murray https://github.com/ActiveVisionLab/clouds/blob/master/doc/FinalReport/report.pdf, 2017 | | 2017 |