Repetitive elements may comprise over two-thirds of the human genome APJ de Koning, W Gu, TA Castoe, MA Batzer, DD Pollock PLoS genetics 7 (12), e1002384, 2011 | 1298 | 2011 |
Evolutionary origins of the SARS-CoV-2 sarbecovirus lineage responsible for the COVID-19 pandemic MF Boni, P Lemey, X Jiang, TTY Lam, BW Perry, TA Castoe, A Rambaut, ... Nature microbiology 5 (11), 1408-1417, 2020 | 1050 | 2020 |
The genome of the green anole lizard and a comparative analysis with birds and mammals J Alföldi, F Di Palma, M Grabherr, C Williams, L Kong, E Mauceli, ... Nature 477 (7366), 587-591, 2011 | 696 | 2011 |
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system FJ Vonk, NR Casewell, CV Henkel, AM Heimberg, HJ Jansen, ... Proceedings of the National Academy of Sciences 110 (51), 20651-20656, 2013 | 503 | 2013 |
The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage H Bradley Shaffer, P Minx, DE Warren, AM Shedlock, RC Thomson, ... Genome biology 14, 1-23, 2013 | 366 | 2013 |
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs RE Green, EL Braun, J Armstrong, D Earl, N Nguyen, G Hickey, ... Science 346 (6215), 1254449, 2014 | 364 | 2014 |
Evidence for an ancient adaptive episode of convergent molecular evolution TA Castoe, APJ de Koning, HM Kim, W Gu, BP Noonan, G Naylor, ... Proceedings of the National Academy of Sciences 106 (22), 8986-8991, 2009 | 337 | 2009 |
The Burmese python genome reveals the molecular basis for extreme adaptation in snakes TA Castoe, APJ de Koning, KT Hall, DC Card, DR Schield, MK Fujita, ... Proceedings of the National Academy of Sciences 110 (51), 20645-20650, 2013 | 319 | 2013 |
Rapid microsatellite identification from Illumina paired-end genomic sequencing in two birds and a snake TA Castoe, AW Poole, APJ De Koning, KL Jones, DF Tomback, ... PloS one 7 (2), e30953, 2012 | 304 | 2012 |
Bayesian mixed models and the phylogeny of pitvipers (Viperidae: Serpentes) TA Castoe, CL Parkinson Molecular phylogenetics and evolution 39 (1), 91-110, 2006 | 285 | 2006 |
Data partitions and complex models in Bayesian analysis: the phylogeny of gymnophthalmid lizards TA Castoe, TM Doan, CL Parkinson Systematic biology 53 (3), 448-469, 2004 | 272 | 2004 |
Rapid identification of thousands of copperhead snake (Agkistrodon contortrix) microsatellite loci from modest amounts of 454 shotgun genome sequence TA Castoe, AW Poole, W Gu, AP Jason de Koning, JM Daza, EN Smith, ... Molecular Ecology Resources 10 (2), 341-347, 2010 | 234 | 2010 |
Comparative phylogeography of pitvipers suggests a consensus of ancient Middle American highland biogeography TA Castoe, JM Daza, EN Smith, MM Sasa, U Kuch, JA Campbell, ... Journal of Biogeography 36 (1), 88-103, 2009 | 233 | 2009 |
Comparative phylogeographic analyses illustrate the complex evolutionary history of threatened cloud forests of northern Mesoamerica JF Ornelas, V Sosa, DE Soltis, JM Daza, C González, PS Soltis, ... PloS one 8 (2), e56283, 2013 | 203 | 2013 |
LTR retrotransposons contribute to genomic gigantism in plethodontid salamanders C Sun, DB Shepard, RA Chong, J López Arriaza, K Hall, TA Castoe, ... Genome biology and evolution 4 (2), 168-183, 2012 | 187 | 2012 |
Phylogeographic structure and historical demography of the western diamondback rattlesnake (Crotalus atrox): a perspective on North American desert biogeography TA Castoe, CL Spencer, CL Parkinson Molecular Phylogenetics and Evolution 42 (1), 193-212, 2007 | 182 | 2007 |
Using regional comparative phylogeographic data from snake lineages to infer historical processes in Middle America JM Daza, TA Castoe, CL Parkinson Ecography 33 (2), 343-354, 2010 | 173 | 2010 |
Sciurid phylogeny and the paraphyly of Holarctic ground squirrels (Spermophilus) MD Herron, TA Castoe, CL Parkinson Molecular phylogenetics and evolution 31 (3), 1015-1030, 2004 | 170 | 2004 |
Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes JA St John, EL Braun, SR Isberg, LG Miles, AY Chong, J Gongora, ... Genome biology 13, 1-12, 2012 | 163 | 2012 |
Phylogenetic relationships among Staphylococcus species and refinement of cluster groups based on multilocus data RP Lamers, G Muthukrishnan, TA Castoe, S Tafur, AM Cole, ... BMC evolutionary biology 12, 1-15, 2012 | 149 | 2012 |