| Bias in error estimation when using cross-validation for model selection S Varma, R Simon BMC bioinformatics 7, 1-8, 2006 | 1933 | 2006 |
| CellMiner: a web-based suite of genomic and pharmacologic tools to explore transcript and drug patterns in the NCI-60 cell line set WC Reinhold, M Sunshine, H Liu, S Varma, KW Kohn, J Morris, ... Cancer research 72 (14), 3499-3511, 2012 | 859 | 2012 |
| The clinical relevance of cancer cell lines JP Gillet, S Varma, MM Gottesman Journal of the National Cancer Institute 105 (7), 452-458, 2013 | 764 | 2013 |
| Redefining the relevance of established cancer cell lines to the study of mechanisms of clinical anti-cancer drug resistance JP Gillet, AM Calcagno, S Varma, M Marino, LJ Green, MI Vora, C Patel, ... Proceedings of the National Academy of Sciences 108 (46), 18708-18713, 2011 | 599 | 2011 |
| Evidence for brain glucose dysregulation in Alzheimer's disease Y An, VR Varma, S Varma, R Casanova, E Dammer, O Pletnikova, ... Alzheimer's & dementia 14 (3), 318-329, 2018 | 460 | 2018 |
| Effectiveness of gene expression profiling for response prediction of rectal adenocarcinomas to preoperative chemoradiotherapy BM Ghadimi, M Grade, MJ Difilippantonio, S Varma, R Simon, ... Journal of clinical oncology 23 (9), 1826-1838, 2005 | 440 | 2005 |
| Metabolic network failures in Alzheimer's disease: A biochemical road map JB Toledo, M Arnold, G Kastenmüller, R Chang, RA Baillie, X Han, ... Alzheimer's & Dementia 13 (9), 965-984, 2017 | 436 | 2017 |
| Brain and blood metabolite signatures of pathology and progression in Alzheimer disease: A targeted metabolomics study VR Varma, AM Oommen, S Varma, R Casanova, Y An, RM Andrews, ... PLoS medicine 15 (1), e1002482, 2018 | 423 | 2018 |
| CellMiner: a relational database and query tool for the NCI-60 cancer cell lines UT Shankavaram, S Varma, D Kane, M Sunshine, KK Chary, ... BMC genomics 10, 1-10, 2009 | 382 | 2009 |
| Putative DNA/RNA helicase Schlafen-11 (SLFN11) sensitizes cancer cells to DNA-damaging agents G Zoppoli, M Regairaz, E Leo, WC Reinhold, S Varma, A Ballestrero, ... Proceedings of the National Academy of Sciences 109 (37), 15030-15035, 2012 | 344 | 2012 |
| DNA fingerprinting of the NCI-60 cell line panel PL Lorenzi, WC Reinhold, S Varma, AA Hutchinson, Y Pommier, ... Molecular cancer therapeutics 8 (4), 713-724, 2009 | 182 | 2009 |
| Blood metabolite markers of preclinical Alzheimer's disease in two longitudinally followed cohorts of older individuals R Casanova, S Varma, B Simpson, M Kim, Y An, S Saldana, C Riveros, ... Alzheimer's & Dementia 12 (7), 815-822, 2016 | 164 | 2016 |
| CellMiner Cross-Database (CellMinerCDB) version 1.2: Exploration of patient-derived cancer cell line pharmacogenomics A Luna, F Elloumi, S Varma, Y Wang, VN Rajapakse, MI Aladjem, ... Nucleic acids research 49 (D1), D1083-D1093, 2021 | 153 | 2021 |
| Epigenetic inactivation of the putative DNA/RNA helicase SLFN11 in human cancer confers resistance to platinum drugs V Nogales, WC Reinhold, S Varma, A Martinez-Cardus, C Moutinho, ... Oncotarget 7 (3), 3084, 2015 | 151 | 2015 |
| Gene expression profiling reveals a massive, aneuploidy-dependent transcriptional deregulation and distinct differences between lymph node–negative and lymph node–positive … M Grade, P Hörmann, S Becker, AB Hummon, D Wangsa, S Varma, ... Cancer research 67 (1), 41-56, 2007 | 144 | 2007 |
| Dysregulation of multiple metabolic networks related to brain transmethylation and polyamine pathways in Alzheimer disease: A targeted metabolomic and transcriptomic study UV Mahajan, VR Varma, ME Griswold, CT Blackshear, Y An, AM Oommen, ... PLoS medicine 17 (1), e1003012, 2020 | 142 | 2020 |
| Alpha-2 macroglobulin in Alzheimer’s disease: a marker of neuronal injury through the RCAN1 pathway VR Varma, S Varma, Y An, TJ Hohman, S Seddighi, R Casanova, A Beri, ... Molecular psychiatry 22 (1), 13-23, 2017 | 136 | 2017 |
| High recombination rates and hotspots in a Plasmodium falciparum genetic cross H Jiang, N Li, V Gopalan, MM Zilversmit, S Varma, V Nagarajan, J Li, J Mu, ... Genome biology 12, 1-15, 2011 | 126 | 2011 |
| Asparagine synthetase is a predictive biomarker of l-asparaginase activity in ovarian cancer cell lines PL Lorenzi, J Llamas, M Gunsior, L Ozbun, WC Reinhold, S Varma, H Ji, ... Molecular cancer therapeutics 7 (10), 3123-3128, 2008 | 125 | 2008 |
| SCLC-CellMiner: a resource for small cell lung cancer cell line genomics and pharmacology based on genomic signatures C Tlemsani, L Pongor, F Elloumi, L Girard, KE Huffman, N Roper, ... Cell reports 33 (3), 2020 | 123 | 2020 |
