| Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis S Mitra, R Malik, W Wong, A Rahman, AJ Hartemink, Y Pritykin, KK Dey, ... Nature Genetics 56 (4), 627-636, 2024 | 17 | 2024 |
| DIVERSITY in binding, regulation, and evolution revealed from high-throughput ChIP S Mitra, A Biswas, L Narlikar PLOS Computational Biology 14 (4), e1006090, 2018 | 14 | 2018 |
| Linking the dynamics of chromatin occupancy and transcription with predictive models TQ Tran, HK MacAlpine, V Tripuraneni, S Mitra, DM MacAlpine, ... Genome Research 31 (6), 1035-1046, 2021 | 10 | 2021 |
| No Promoter Left Behind (NPLB): learn de novo promoter architectures from genome-wide transcription start sites S Mitra, L Narlikar Bioinformatics 32 (5), 779-781, 2016 | 9 | 2016 |
| RoboCOP: jointly computing chromatin occupancy profiles for numerous factors from chromatin accessibility data S Mitra, J Zhong, TQ Tran, DM MacAlpine, AJ Hartemink Nucleic Acids Research 49 (14), 7925-7938, 2021 | 6 | 2021 |
| Low Kit expression identifies Hematopoietic Stem Cell subsets with enhanced lymphoid potential in mice and humans HK Elias, S Mitra, MB da Silva, A Rajagopalan, B Gipson, N Lee, AI Kousa, ... bioRxiv, 2024 | | 2024 |
| Author Correction: Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis S Mitra, R Malik, W Wong, A Rahman, AJ Hartemink, Y Pritykin, KK Dey, ... Nature Genetics, 1-1, 2024 | | 2024 |
| Low CD117 Expression Identifies Hematopoietic Stem Cell Subsets with Enhanced Lymphoid Potential in Mice and Humans HK Elias, S Mitra, B Gipson, MB da Silva, N Lee, MAE Ali, S Grassman, ... Blood 142, 3417, 2023 | | 2023 |
| 3057–MULTIOME ANALYSIS IDENTIFIES HSC SUBSETS WITH THYMIC REGENERATIVE CAPACITY H Elias, S Mitra, M da Silva, B Gipson, C Park, C Leslie, A Bhandoola, ... Experimental Hematology 124, S78, 2023 | | 2023 |
| Deciphering genome-wide chromatin occupancy, dynamics, and their connections to gene regulation S Mitra Duke University, 2022 | | 2022 |
| RoboCOP: Multivariate State Space Model Integrating Epigenomic Accessibility Data to Elucidate Genome-Wide Chromatin Occupancy S Mitra, J Zhong, DM MacAlpine, AJ Hartemink Research in Computational Molecular Biology: 24th Annual International …, 2020 | | 2020 |
Leelavati NarlikarData Science, IISER Pune在 iiserpune.ac.in 的电子邮件经过验证
Leelavati NarlikarData Science, IISER Pune在 iiserpune.ac.in 的电子邮件经过验证