| Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels M Kato, TW Han, S Xie, K Shi, X Du, LC Wu, H Mirzaei, EJ Goldsmith, ... Cell 149 (4), 753-767, 2012 | 2063 | 2012 |
| Substrate and functional diversity of lysine acetylation revealed by a proteomics survey SC Kim, R Sprung, Y Chen, Y Xu, H Ball, J Pei, T Cheng, Y Kho, H Xiao, ... Molecular cell 23 (4), 607-618, 2006 | 1709 | 2006 |
| PROMALS3D: a tool for multiple protein sequence and structure alignments J Pei, BH Kim, NV Grishin Nucleic acids research 36 (7), 2295-2300, 2008 | 1402 | 2008 |
| Cell-free formation of RNA granules: bound RNAs identify features and components of cellular assemblies TW Han, M Kato, S Xie, LC Wu, H Mirzaei, J Pei, M Chen, Y Xie, J Allen, ... Cell 149 (4), 768-779, 2012 | 849 | 2012 |
| Structure prediction for CASP8 with all‐atom refinement using Rosetta S Raman, R Vernon, J Thompson, M Tyka, R Sadreyev, J Pei, D Kim, ... Proteins: Structure, Function, and Bioinformatics 77 (S9), 89-99, 2009 | 595 | 2009 |
| AL2CO: calculation of positional conservation in a protein sequence alignment J Pei, NV Grishin Bioinformatics 17 (8), 700-712, 2001 | 533 | 2001 |
| Lysine acetylation is a highly abundant and evolutionarily conserved modification in Escherichia coli J Zhang, R Sprung, J Pei, X Tan, S Kim, H Zhu, CF Liu, NV Grishin, ... Molecular & Cellular Proteomics 8 (2), 215-225, 2009 | 525 | 2009 |
| PROMALS: towards accurate multiple sequence alignments of distantly related proteins J Pei, NV Grishin Bioinformatics 23 (7), 802-808, 2007 | 414 | 2007 |
| Computed structures of core eukaryotic protein complexes IR Humphreys, J Pei, M Baek, A Krishnakumar, I Anishchenko, ... Science 374 (6573), eabm4805, 2021 | 381 | 2021 |
| ECOD: an evolutionary classification of protein domains H Cheng, RD Schaeffer, Y Liao, LN Kinch, J Pei, S Shi, BH Kim, ... PLoS computational biology 10 (12), e1003926, 2014 | 346 | 2014 |
| The conserved plant sterility gene HAP2 functions after attachment of fusogenic membranes in Chlamydomonas and Plasmodium gametes Y Liu, R Tewari, J Ning, AM Blagborough, S Garbom, J Pei, NV Grishin, ... Genes & development 22 (8), 1051-1068, 2008 | 342 | 2008 |
| Large-scale determination of previously unsolved protein structures using evolutionary information S Ovchinnikov, L Kinch, H Park, Y Liao, J Pei, DE Kim, H Kamisetty, ... elife 4, e09248, 2015 | 272 | 2015 |
| PROMALS3D: multiple protein sequence alignment enhanced with evolutionary and three-dimensional structural information J Pei, NV Grishin Multiple Sequence Alignment Methods, 263-271, 2014 | 252 | 2014 |
| PCMA: fast and accurate multiple sequence alignment based on profile consistency J Pei, R Sadreyev, NV Grishin Bioinformatics 19 (3), 427-428, 2003 | 247 | 2003 |
| GGDEF domain is homologous to adenylyl cyclase J Pei, NV Grishin Proteins: Structure, Function, and Bioinformatics 42 (2), 210-216, 2001 | 187 | 2001 |
| PROMALS3D web server for accurate multiple protein sequence and structure alignments J Pei, M Tang, NV Grishin Nucleic acids research 36 (suppl_2), W30-W34, 2008 | 180 | 2008 |
| The ancient gamete fusogen HAP2 is a eukaryotic class II fusion protein J Fedry, Y Liu, G Pehau-Arnaudet, J Pei, W Li, MA Tortorici, F Traincard, ... Cell 168 (5), 904-915. e10, 2017 | 169 | 2017 |
| Concerted regulation of myofiber-specific gene expression and muscle performance by the transcriptional repressor Sox6 D Quiat, KA Voelker, J Pei, NV Grishin, RW Grange, R Bassel-Duby, ... Proceedings of the National Academy of Sciences 108 (25), 10196-10201, 2011 | 168 | 2011 |
| MUMMALS: multiple sequence alignment improved by using hidden Markov models with local structural information J Pei, NV Grishin Nucleic acids research 34 (16), 4364-4374, 2006 | 161 | 2006 |
| LocNES: a computational tool for locating classical NESs in CRM1 cargo proteins D Xu, K Marquis, J Pei, SC Fu, T Cağatay, NV Grishin, YM Chook Bioinformatics 31 (9), 1357-1365, 2015 | 152 | 2015 |
