Harmonizing semantic annotations for computational models in biology ML Neal, M König, D Nickerson, G Mısırlı, R Kalbasi, A Dräger, K Atalag, ... Briefings in bioinformatics 20 (2), 540-550, 2019 | 69 | 2019 |
Collaborative ontology development for the geosciences R Kalbasi, K Janowicz, F Reitsma, L Boerboom, A Alesheikh Transactions in GIS 18 (6), 834-851, 2014 | 26 | 2014 |
Model annotation and discovery with the Physiome Model Repository DM Sarwar, R Kalbasi, JH Gennari, BE Carlson, ML Neal, B Bono, ... BMC bioinformatics 20, 1-10, 2019 | 24 | 2019 |
A Semantic Web based Framework for Linking Healthcare Information with Computational Physiology Models K Atalag, R Kalbasi, D Nickerson 16th Annual Health Informatics New Zealand (HINZ2017) Conference 2017, 2017 | 1 | 2017 |
So what does linking computational models with clinical data mean and how to do it? K Atalag, R Kalbasi, A Zivaljevic, D Nickerson, J Warren, M Cooling, ... ABI Research Forum 2017, 2017 | 1 | 2017 |
Delving into knowledge modeling software supporting collaborative ontology development R Kalbasi, A Alesheikh, S Amanzadeh International Review on Computers and Software 7 (5), 2045-2053, 2012 | 1 | 2012 |
PhysioMed: A Semantic Web based Framework for Linking Healthcare Information with Computational Physiology Models R Kalbasi, D Nickerson, K Atalag BCB '23: Proceedings of the 14th ACM International Conference on …, 2023 | | 2023 |
A Flexible and Reproducible Framework for Modelling Renal Tubules DP Nickerson, D Sarwar, L Noroozbabaee, R Kalbasi, K Atalag, P Hunter The FASEB Journal 34 (S1), 1-1, 2020 | | 2020 |
Semantics-based model discovery and assembly for renal transport D Sarwar, R Kalbasi, K Atalag, D Nickerson The University of Auckland, 2018 | | 2018 |
Model semantics for discovery, composition, and personalisation D Nickerson, K Atalag, R Kalbasi, D Sarwar, T Yu, P Hunter The University of Auckland, 2018 | | 2018 |
Linking Computational Physiology Models with Clinical Data K Atalag, R Kalbasi, D Nickerson, P Hunter The University of Auckland, 2017 | | 2017 |
Bridging Computational Modelling and Clinical Information using openEHR and Semantic Web K Atalag, R Kalbasi, A Zivaljevic, M Cooling, D Nickerson, P Hunter HARMONY 2016, 2016 | | 2016 |