A promoter-level mammalian expression atlas Fantom Consortium Nature 507 (7493), 462, 2014 | 1711 | 2014 |
Redefinition of the human mast cell transcriptome by deep-CAGE sequencing E Motakis, S Guhl, Y Ishizu, M Itoh, H Kawaji, M de Hoon, T Lassmann, ... Blood, The Journal of the American Society of Hematology 123 (17), e58-e67, 2014 | 212 | 2014 |
C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution T Kouno, J Moody, ATJ Kwon, Y Shibayama, S Kato, Y Huang, M Böttcher, ... Nature communications 10 (1), 1-12, 2019 | 116 | 2019 |
Data-driven approach to predict survival of cancer patients E Motakis, AV Ivshina, VA Kuznetsov IEEE Engineering in Medicine and Biology Magazine 28 (4), 58-66, 2009 | 63 | 2009 |
Prioritizing candidates of post–myocardial infarction heart failure using plasma proteomics and single-cell transcriptomics MY Chan, M Efthymios, SH Tan, JW Pickering, R Troughton, C Pemberton, ... Circulation 142 (15), 1408-1421, 2020 | 58 | 2020 |
Complex sense-antisense architecture of TNFAIP1/POLDIP2 on 17q11. 2 represents a novel transcriptional structural-functional gene module involved in breast cancer progression OV Grinchuk, E Motakis, VA Kuznetsov BMC genomics 11 (1), 1-21, 2010 | 50 | 2010 |
Variance stabilization and normalization for one-color microarray data using a data-driven multiscale approach ES Motakis, GP Nason, P Fryzlewicz, GA Rutter Bioinformatics 22 (20), 2547-2553, 2006 | 50 | 2006 |
Robust CTCF-Based Chromatin Architecture Underpins Epigenetic Changes in the Heart Failure Stress–Gene Response DP Lee, WLW Tan, CG Anene-Nzelu, CJM Lee, PY Li, TDA Luu, CX Chan, ... Circulation 139 (16), 1937-1956, 2019 | 46 | 2019 |
Transposon insertional mutagenesis in mice identifies human breast cancer susceptibility genes and signatures for stratification L Chen, P Jenjaroenpun, AMC Pillai, AV Ivshina, GS Ow, M Efthimios, ... Proceedings of the National Academy of Sciences 114 (11), E2215-E2224, 2017 | 46 | 2017 |
Impact of adenoviral transduction with SREBP1c or AMPK on pancreatic islet gene expression profile: analysis with oligonucleotide microarrays F Diraison, E Motakis, LE Parton, GP Nason, I Leclerc, GA Rutter Diabetes 53 (suppl 3), S84-S91, 2004 | 41 | 2004 |
Retinoic acid potentiates inflammatory cytokines in human mast cells: Identification of mast cells as prominent constituents of the skin retinoid network M Babina, S Guhl, E Motakis, M Artuc, T Hazzan, M Worm, ARR Forrest, ... Molecular and cellular endocrinology 406, 49-59, 2015 | 29 | 2015 |
A robust tool for discriminative analysis and feature selection in paired samples impacts the identification of the genes essential for reprogramming lung tissue to adenocarcinoma SH Toh, P Prathipati, E Motakis, CK Kwoh, SP Yenamandra, ... BMC genomics 12 (3), 1-24, 2011 | 23 | 2011 |
Sense-antisense gene-pairs in breast cancer and associated pathological pathways OV Grinchuk, E Motakis, SP Yenamandra, GS Ow, P Jenjaroenpun, ... Oncotarget 6 (39), 42197, 2015 | 20 | 2015 |
A pragmatic randomised controlled trial of preferred intensity exercise in depressed adult women in the United Kingdom: secondary analysis of individual variability of depression ID Morres, A Hinton-Bayre, E Motakis, T Carter, P Callaghan BMC public health 19 (1), 1-11, 2019 | 15 | 2019 |
Mast cell transcriptome elucidation: what are the implications for allergic disease in the clinic and where do we go next? M Babina, E Motakis, T Zuberbier Expert review of clinical immunology 10 (8), 977-980, 2014 | 10 | 2014 |
Genome-scale identification of survival significant genes and gene pairs E Motakis, VA Kuznetsov Proceedings of the World Congress on Engineering and Computer Science 1, 2009 | 7 | 2009 |
Dimethyl sulfoxide (DMSO) enhances direct cardiac reprogramming by inhibiting the bromodomain of coactivators CBP/p300 CK Lim, M Efthymios, W Tan, MI Autio, Z Tiang, PY Li, RSY Foo Journal of Molecular and Cellular Cardiology, 2021 | 6 | 2021 |
Sense-antisense gene pairs for patient stratification, prognosis, and therapeutic biomarkers identification O Grinchuk, E Motakis, SP Yenamandra, VA Kuznetsov | 6 | 2015 |
Macrostate identification from biomolecular simulations through time series analysis W Zhou, E Motakis, G Fuentes, CS Verma Journal of chemical information and modeling 52 (9), 2319-2324, 2012 | 6 | 2012 |
Low-and high-agressive genetic breast cancer subtypes and significant survival gene signatures VA Kuznetsov, E Motakis, AV Ivshina 2008 IEEE International Joint Conference on Neural Networks (IEEE World …, 2008 | 6 | 2008 |