Deep evolutionary analysis reveals the design principles of fold A glycosyltransferases R Taujale, A Venkat, LC Huang, W Yeung, K Rasheed, AS Edison, ... eLife, eLife 2020;9:e54532, 2020 | 70 | 2020 |
Responses to 10 common criticisms of anti-racism action in STEMM ML Gosztyla, L Kwong, NA Murray, CE Williams, N Behnke, P Curry, ... PLoS Computational Biology 17 (7), e1009141, 2021 | 29 | 2021 |
Polymerization of the backbone of the pectic polysaccharide rhamnogalacturonan I RA Amos, MA Atmodjo, C Huang, Z Gao, A Venkat, R Taujale, N Kannan, ... Nature plants 8 (11), 1289-1303, 2022 | 18 | 2022 |
Quantitative analysis of the trends exhibited by the three interdisciplinary biological sciences: biophysics, bioinformatics, and systems biology J Kang, S Park, A Venkat, A Gopinath Journal of microbiology & biology education 16 (2), 198-202, 2015 | 14 | 2015 |
Evolution of functional diversity in the holozoan tyrosine kinome W Yeung, A Kwon, R Taujale, C Bunn, A Venkat, N Kannan Molecular Biology and Evolution 38 (12), 5625-5639, 2021 | 13 | 2021 |
KinOrtho: a method for mapping human kinase orthologs across the tree of life and illuminating understudied kinases LC Huang, R Taujale, N Gravel, A Venkat, W Yeung, DP Byrne, PA Eyers, ... BMC bioinformatics 22, 1-25, 2021 | 12 | 2021 |
Quantitative Structure–Mutation–Activity Relationship Tests (QSMART) model for protein kinase inhibitor response prediction LC Huang, W Yeung, Y Wang, H Cheng, A Venkat, S Li, P Ma, K Rasheed, ... BMC bioinformatics 21, 1-22, 2020 | 12 | 2020 |
Peters plus syndrome mutations affect the function and stability of human β1, 3-glucosyltransferase A Zhang, A Venkat, R Taujale, JL Mull, A Ito, N Kannan, RS Haltiwanger Journal of Biological Chemistry 297 (1), 2021 | 9 | 2021 |
Influence of water hardness on accumulation and effects of silver in the green alga, Raphidocelis subcapitata A Venkat, AL Amerson, GK Bielmyer-Fraser Georgia Journal of Science 74 (2), 5, 2016 | 8 | 2016 |
Modularity of the hydrophobic core and evolution of functional diversity in fold A glycosyltransferases A Venkat, D Tehrani, R Taujale, W Yeung, N Gravel, KW Moremen, ... Journal of Biological Chemistry 298 (8), 2022 | 6 | 2022 |
Xai meets biology: A comprehensive review of explainable ai in bioinformatics applications Z Zhou, M Hu, M Salcedo, N Gravel, W Yeung, A Venkat, D Guo, J Zhang, ... arXiv preprint arXiv:2312.06082, 2023 | 4 | 2023 |
Tree visualizations of protein sequence embedding space enable improved functional clustering of diverse protein superfamilies W Yeung, Z Zhou, L Mathew, N Gravel, R Taujale, B O’Boyle, M Salcedo, ... Briefings in Bioinformatics 24 (1), bbac619, 2023 | 4 | 2023 |
Phosphorylation-dependent pseudokinase domain dimerization drives full-length MLKL oligomerization Y Meng, SE Garnish, KA Davies, KA Black, AP Leis, CR Horne, ... Nature Communications 14 (1), 6804, 2023 | 3 | 2023 |
Mechanistic and evolutionary insights into isoform-specific 'supercharging' in DCLK family kinases A Venkat, G Watterson, DP Byrne, BO Boyle, S Shrestha, N Gravel, ... bioRxiv, 2023.03. 29.534689, 2023 | 3 | 2023 |
PathInsight: A Novel Tool for Modeling Biomolecular Pathways A Venkat University of California, San Diego, 2017 | 3 | 2017 |
Prevalence and homology of the pneumococcal serine-rich repeat protein at the global scale J Aceil, A Venkat, E Pan, N Kannan, FY Avci Microbiology Spectrum 11 (3), e03252-22, 2023 | 2 | 2023 |
Redox regulation of brain selective kinases BRSK1/2: Implications for dynamic control of the eukaryotic AMPK family through Cys-based mechanisms GN Bendzunas, DP Byrne, S Shrestha, LA Daly, SO Oswald, S Katiyar, ... bioRxiv, 2023 | 1 | 2023 |
GTXplorer: A portal to navigate and visualize the evolutionary information encoded in fold A glycosyltransferases R Taujale, S Soleymani, A Priyadarshi, A Venkat, W Yeung, KJ Kochut, ... Glycobiology 31 (11), 1472-1477, 2021 | 1 | 2021 |
Glydentify, a tool for unsupervised classification of glycosyltransferase function A Venkat, N Kannan GLYCOBIOLOGY 33 (11), 1065-1065, 2023 | | 2023 |
Principles of Modularity in Enzyme Evolution A Venkat University of Georgia, 2023 | | 2023 |