Single-cell landscape of the ecosystem in early-relapse hepatocellular carcinoma Y Sun, L Wu, YU Zhong, K Zhou, Y Hou, Z Wang, Z Zhang, J Xie, C Wang, ... Cell 184 (2), 404-421. e16, 2021 | 560 | 2021 |
Dissecting spatial heterogeneity and the immune-evasion mechanism of CTCs by single-cell RNA-seq in hepatocellular carcinoma YF Sun, L Wu, SP Liu, MM Jiang, B Hu, KQ Zhou, W Guo, Y Xu, Y Zhong, ... Nature Communications 12 (1), 4091, 2021 | 144 | 2021 |
An invasive zone in human liver cancer identified by Stereo-seq promotes hepatocyte–tumor cell crosstalk, local immunosuppression and tumor progression L Wu, J Yan, Y Bai, F Chen, X Zou, J Xu, A Huang, L Hou, Y Zhong, Z Jing, ... Cell research 33 (8), 585-603, 2023 | 70 | 2023 |
Full-length single-cell RNA-seq applied to a viral human cancer: applications to HPV expression and splicing analysis in HeLa S3 cells L Wu, X Zhang, Z Zhao, L Wang, B Li, G Li, M Dean, Q Yu, Y Wang, X Lin, ... Gigascience 4 (1), s13742-015-0091-4, 2015 | 60 | 2015 |
Spatial transcriptomics technology in cancer research Q Yu, M Jiang, L Wu Frontiers in Oncology 12, 1019111, 2022 | 43 | 2022 |
Evolution of multiple cell clones over a 29-year period of a CLL patient Z Zhao, L Goldin, S Liu, L Wu, W Zhou, H Lou, Q Yu, SX Tsang, M Jiang, ... Nature communications 7 (1), 13765, 2016 | 33 | 2016 |
Spatially resolved gene regulatory and disease-related vulnerability map of the adult Macaque cortex Y Lei, M Cheng, Z Li, Z Zhuang, L Wu, Y Sun, L Han, Z Huang, Y Wang, ... Nature communications 13 (1), 6747, 2022 | 27 | 2022 |
Single-cell multiomics reveals heterogeneous cell states linked to metastatic potential in liver cancer cell lines S Wang, J Xie, X Zou, T Pan, Q Yu, Z Zhuang, Y Zhong, X Zhao, Z Wang, ... Iscience 25 (3), 2022 | 13 | 2022 |
Population-wide sampling of retrotransposon insertion polymorphisms using deep sequencing and efficient detection Q Yu, W Zhang, X Zhang, Y Zeng, Y Wang, Y Wang, L Xu, X Huang, N Li, ... Gigascience 6 (9), 1-11, 2017 | 12 | 2017 |
Genomic and microbial factors affect the prognosis of anti-pd-1 immunotherapy in nasopharyngeal carcinoma L Xu, Y Ma, C Fang, Z Peng, F Gao, JM Moll, S Qin, Q Yu, Y Hou, ... Frontiers in Oncology 12, 953884, 2022 | 11 | 2022 |
Single-cell RNA profiling links ncRNAs to spatiotemporal gene expression during C. elegans embryogenesis Y Sun, Q Yu, L Li, Z Mei, B Zhou, S Liu, T Pan, L Wu, Y Lei, L Liu, ... Scientific Reports 10 (1), 18863, 2020 | 9 | 2020 |
Inferring cell trajectories of spatial transcriptomics via optimal transport analysis X Shen, K Huang, L Zuo, Z Ye, Z Li, Q Yu, X Zou, X Wei, P Xu, X Jin, X Xu, ... bioRxiv, 2023.09. 04.556175, 2023 | 2 | 2023 |
Pan-cancer scRNA-seq analysis reveals immunological and diagnostic significance of the peripheral blood mononuclear cells Y Zhang, X Zhou, Y Zhong, X Chen, Z Li, R Li, P Qin, S Wang, J Yin, S Liu, ... Human Molecular Genetics 33 (4), 342-354, 2024 | 1 | 2024 |
Bulk and single-cell transcriptional profiles reveal roles of fibroblasts and immunocytes in pan-cancer progression Y Sun, B Song, Q Yu, H Yang, W Dong Human Biology 94 (4), 753-768, 2024 | | 2024 |
Inactivated cGAS‐STING Signaling Facilitates Endocrine Resistance by Forming a Positive Feedback Loop with AKT Kinase in ER+ HER2–Breast Cancer KM Zhang, DC Zhao, ZY Li, Y Wang, JN Liu, T Du, L Zhou, YH Chen, ... Advanced Science, 2403592, 2024 | | 2024 |
DAIS: a method for identifying spatial domains based on density clustering of spatial omics data. Q Yu, R Tian, X Jin, L Wu Journal of Genetics and Genomics= Yi Chuan xue bao, S1673-8527 (24) 00071, 2024 | | 2024 |
Analysis of normal tissues adjacent to the tumour-specific expressed genes in breast cancer Yu QC, Song B, Zou XX, Wang L, Liu Q, Li B, Ma K 遗传 41 (7), 625-633, 2019 | | 2019 |
Establishment of an Integrated Computational Workflow for Single Cell RNA-Seq Dataset Miaomiao Jiang, Qichao Yu, Jianming Xie, Shiping Liu The 9th International Conference on Bioscience, Biochemistry and …, 2019 | | 2019 |