| A 20-gene set predictive of progression to severe dengue M Robinson, TE Sweeney, R Barouch-Bentov, MK Sahoo, L Kalesinskas, ... Cell reports 26 (5), 1104-1111. e4, 2019 | 73 | 2019 |
| Machine learning for initial insulin estimation in hospitalized patients M Nguyen, I Jankovic, L Kalesinskas, M Baiocchi, JH Chen Journal of the American Medical Informatics Association 28 (10), 2212-2219, 2021 | 32 | 2021 |
| Computational drug repositioning of atorvastatin for ulcerative colitis L Bai, MKD Scott, E Steinberg, L Kalesinskas, A Habtezion, NH Shah, ... Journal of the American Medical Informatics Association 28 (11), 2325-2335, 2021 | 19 | 2021 |
| Genome sequences and annotation of two urinary isolates of E. coli TK Price, A Mehrtash, L Kalesinskas, K Malki, EE Hilt, C Putonti, AJ Wolfe Standards in genomic sciences 11, 1-8, 2016 | 17 | 2016 |
| Exploring the Diversity of Bacillus whole genome sequencing projects using Peasant, the Prokaryotic Assembly and Annotation Tool J Brenner, L Kalesinskas, C Putonti BioRxiv, 132084, 2017 | 13 | 2017 |
| S-plot2: rapid visual and statistical analysis of genomic sequences L Kalesinskas, E Cudone, Y Fofanov, C Putonti Evolutionary Bioinformatics 14, 1176934318797354, 2018 | 10 | 2018 |
| A 20-Gene Set Predictive of Progression to Severe Dengue. Cell Rep. 2019; 26 (5): 1104–11 e4 M Robinson, TE Sweeney, R Barouch-Bentov, MK Sahoo, L Kalesinskas, ... Epub 2019/01/31. https://doi. org/10.1016/j. celrep. 2019.01. 033 PMID: 30699342, 0 | 7 | |
| Draft genome sequence of a urinary isolate of Lactobacillus crispatus TK Price, M Shaheen, L Kalesinskas, K Malki, EE Hilt, C Putonti, AJ Wolfe Genome Announcements 4 (6), 10.1128/genomea. 01278-16, 2016 | 5 | 2016 |
| Mass-cytometry-based quantification of global histone post-translational modifications at single-cell resolution across peripheral immune cells in IBD L Bai, D Dermadi, L Kalesinskas, M Dvorak, SE Chang, A Ganesan, ... Journal of Crohn's and Colitis 17 (5), 804-815, 2023 | 4 | 2023 |
| Draft genome sequence of Staphylococcus epidermidis (Winslow and Winslow) Evans (ATCC 14990) C Putonti, L Kalesinskas, E Cudone, KC Engelbrecht, DW Koenig, ... Genome Announcements 5 (27), 10.1128/genomea. 00619-17, 2017 | 4 | 2017 |
| Increasing reproducibility, robustness, and generalizability of biomarker selection from meta-analysis using Bayesian methodology L Kalesinskas, S Gupta, P Khatri PLoS computational biology 18 (6), e1010260, 2022 | 3 | 2022 |
| Crosstalk of histone modifications in the healthy human immune system D Dermadi, L Kalesinskas, A Ganesan, A Kuo, P Cheung, S Cheng, ... BioRxiv, 2022.01. 21.477300, 2022 | 3 | 2022 |
| SNPs2ChIP: Latent Factors of ChIP-seq to infer functions of non-coding SNPs S Anand, L Kalesinskas, C Smail, Y Tanigawa BIOCOMPUTING 2019: Proceedings of the Pacific Symposium, 184-195, 2018 | 3 | 2018 |
| Draft genome sequence of Micrococcus luteus (Schroeter) Cohn (ATCC 12698) C Putonti, E Cudone, L Kalesinskas, KC Engelbrecht, DW Koenig, ... Genome Announcements 5 (27), 10.1128/genomea. 00576-17, 2017 | 3 | 2017 |
| Ancestry-based differences in the immune phenotype are associated with lupus activity S Slight-Webb, K Thomas, M Smith, CA Wagner, S Macwana, A Bylinska, ... JCI insight 8 (16), 2023 | 2 | 2023 |
| Ancestry-based differences in the immune system are associated with lupus severity S Slight-Webb, K Thomas, M Smith, S Macwana, A Bylinska, J Kheir, ... | 2 | 2021 |
| Inferring direction of associations between histone modifications using a neural processes-based framework A Ganesan, D Dermadi, L Kalesinskas, M Donato, R Sowers, PJ Utz, ... Iscience 26 (1), 2023 | 1 | 2023 |
| Epigenetic Profiling of PTPN11 Mutant JMML Hematopoietic Stem and Progenitor Cells Reveals an Aberrant Histone Landscape R Sinha, M Dvorak, A Ganesan, L Kalesinskas, CM Niemeyer, C Flotho, ... Cancers 15 (21), 5204, 2023 | | 2023 |
| Epigenetic Profiling of PTPN11 Mutant JMML Hematopoietic Stem and Progenitor Cells Reveals an Aberrant Histone Landscape. Cancers 2023, 15, 5204 R Sinha, M Dvorak, A Ganesan, L Kalesinskas, CM Niemeyer, C Flotho, ... | | 2023 |
| Imputing abundances and inferring direction of associations between histone modifications using neural processes A Ganesan, D Dermadi, L Kalesinskas, M Donato, R Sowers, PJ Utz, ... bioRxiv, 2022.07. 21.501033, 2022 | | 2022 |
