CIViC is a community knowledgebase for expert crowdsourcing the clinical interpretation of variants in cancer M Griffith, NC Spies, K Krysiak, JF McMichael, AC Coffman, AM Danos, ... Nature genetics 49 (2), 170-174, 2017 | 591 | 2017 |
Glycogen branches out: new perspectives on the role of glycogen metabolism in the integration of metabolic pathways CC Greenberg, MJ Jurczak, AM Danos, MJ Brady American Journal of Physiology-Endocrinology and Metabolism 291 (1), E1-E8, 2006 | 238 | 2006 |
Standards for the classification of pathogenicity of somatic variants in cancer (oncogenicity): Joint recommendations of Clinical Genome Resource (ClinGen), Cancer Genomics … P Horak, M Griffith, AM Danos, BA Pitel, S Madhavan, X Liu, C Chow, ... Genetics in Medicine 24 (5), 986-998, 2022 | 161 | 2022 |
Standard operating procedure for somatic variant refinement of sequencing data with paired tumor and normal samples EK Barnell, P Ronning, KM Campbell, K Krysiak, BJ Ainscough, LM Sheta, ... Genetics in Medicine 21 (4), 972-981, 2019 | 92 | 2019 |
Transgenic overexpression of protein targeting to glycogen markedly increases adipocytic glycogen storage in mice MJ Jurczak, AM Danos, VR Rehrmann, MB Allison, CC Greenberg, ... American Journal of Physiology-Endocrinology And Metabolism 292 (3), E952-E963, 2007 | 48 | 2007 |
Text-mining clinically relevant cancer biomarkers for curation into the CIViC database J Lever, MR Jones, AM Danos, K Krysiak, M Bonakdar, JK Grewal, ... Genome medicine 11 (1), 1-16, 2019 | 42 | 2019 |
Gene expression profiles in HEK-293 cells with low or high store-operated calcium entry: can regulatory as well as regulated genes be identified? TK Zagranichnaya, X Wu, AM Danos, ML Villereal Physiological genomics 21 (1), 14-33, 2005 | 37 | 2005 |
Central role for protein targeting to glycogen in the maintenance of cellular glycogen stores in 3T3-L1 adipocytes CC Greenberg, AM Danos, MJ Brady Molecular and cellular biology 26 (1), 334-342, 2006 | 33 | 2006 |
The role of protein translocation in the regulation of glycogen metabolism MJ Jurczak, AM Danos, VR Rehrmann, MJ Brady Journal of cellular biochemistry 104 (2), 435-443, 2008 | 31 | 2008 |
CIViCdb 2022: evolution of an open-access cancer variant interpretation knowledgebase K Krysiak, AM Danos, J Saliba, JF McMichael, AC Coffman, S Kiwala, ... Nucleic Acids Research 51 (D1), D1230-D1241, 2023 | 18 | 2023 |
Standard operating procedure for curation and clinical interpretation of variants in cancer AM Danos, K Krysiak, EK Barnell, AC Coffman, JF McMichael, S Kiwala, ... Genome medicine 11 (1), 1-12, 2019 | 17 | 2019 |
Altering PPARγ ligand selectivity impairs adipogenesis by thiazolidinediones but not hormonal inducers SP Samarasinghe, MM Sutanto, AM Danos, DN Johnson, MJ Brady, ... Obesity 17 (5), 965-972, 2009 | 15 | 2009 |
Adapting crowdsourced clinical cancer curation in CIViC to the ClinGen minimum variant level data community‐driven standards AM Danos, DI Ritter, AH Wagner, K Krysiak, D Sonkin, C Micheel, ... Human mutation 39 (11), 1721-1732, 2018 | 14 | 2018 |
CIViCpy: a Python software development and analysis toolkit for the CIViC knowledgebase AH Wagner, S Kiwala, AC Coffman, JF McMichael, KC Cotto, TB Mooney, ... JCO clinical cancer informatics 4, 245-253, 2020 | 12 | 2020 |
Functional inactivation of Rb sensitizes cancer cells to TSC2 inactivation induced cell death AM Danos, Y Liao, X Li, W Du Cancer letters 328 (1), 36-43, 2013 | 9 | 2013 |
CIViC: A knowledgebase for expert-crowdsourcing the clinical interpretation of variants in cancer M Griffith, NC Spies, K Krysiak, AC Coffman, JF McMichael, BJ Ainscough, ... bioRxiv, 072892, 2016 | 7 | 2016 |
Differential regulation of glycogenolysis by mutant protein phosphatase-1 glycogen-targeting subunits AM Danos, S Osmanovic, MJ Brady Journal of Biological Chemistry 284 (29), 19544-19553, 2009 | 7 | 2009 |
A community approach to the cancer-variant-interpretation bottleneck K Krysiak, AM Danos, S Kiwala, JF McMichael, AC Coffman, EK Barnell, ... Nature Cancer 3 (5), 522-525, 2022 | 5 | 2022 |
Chaostheorie und Geschichte M Danos, S Fitzpatrick, A Danos, M Krämer Geschichte und Gesellschaft, 325-338, 2004 | 5 | 2004 |
Open-sourced CIViC annotation pipeline to identify and annotate clinically relevant variants using single-molecule molecular inversion probes EK Barnell, A Waalkes, MC Mosior, K Penewit, KC Cotto, AM Danos, ... JCO clinical cancer informatics 3, 1-12, 2019 | 3 | 2019 |