| Protein contact networks: an emerging paradigm in chemistry L Di Paola, M De Ruvo, P Paci, D Santoni, A Giuliani Chemical reviews 113 (3), 1598-1613, 2013 | 289 | 2013 |
| ACTN3 genotyping by real-time PCR in the Italian population and athletes A Paparini, M Ripani, GD Giordano, D Santoni, F Pigozzi, ... Medicine & Science in Sports & Exercise 39 (5), 810-815, 2007 | 99 | 2007 |
| A genomic glimpse of aminoacyl-tRNA synthetases in malaria parasite Plasmodium falciparum TK Bhatt, C Kapil, S Khan, MA Jairajpuri, V Sharma, D Santoni, ... BMC genomics 10, 1-14, 2009 | 94 | 2009 |
| Swimming pools and fungi: an environmental epidemiology survey in Italian indoor swimming facilities G Brandi, M Sisti, A Paparini, G Gianfranceschi, GF Schiavano, ... International Journal of environmental health research 17 (3), 197-206, 2007 | 81 | 2007 |
| Implementation of a regulatory gene network to simulate the TH1/2 differentiation in an agent-based model of hypersensitivity reactions D Santoni, M Pedicini, F Castiglione Bioinformatics 24 (11), 1374-1380, 2008 | 69 | 2008 |
| Shedding light on protein–ligand binding by graph theory: the topological nature of allostery M De Ruvo, A Giuliani, P Paci, D Santoni, L Di Paola Biophysical Chemistry 165, 21-29, 2012 | 62 | 2012 |
| GIANT: a cytoscape plugin for modular networks F Cumbo, P Paci, D Santoni, L Di Paola, A Giuliani PLoS One 9 (10), e105001, 2014 | 48 | 2014 |
| Modules identification in protein structures: the topological and geometrical solutions S Tasdighian, L Di Paola, M De Ruvo, P Paci, D Santoni, P Palumbo, ... Journal of chemical information and modeling 54 (1), 159-168, 2014 | 47 | 2014 |
| Proteins as sponges: a statistical journey along protein structure organization principles L Di Paola, P Paci, D Santoni, M De Ruvo, A Giuliani Journal of chemical information and modeling 52 (2), 474-482, 2012 | 32 | 2012 |
| Combining network modeling and gene expression microarray analysis to explore the dynamics of Th1 and Th2 cell regulation M Pedicini, F Barrenäs, T Clancy, F Castiglione, E Hovig, K Kanduri, ... PLoS computational biology 6 (12), e1001032, 2010 | 31 | 2010 |
| Nullomers and high order nullomers in genomic sequences D Vergni, D Santoni PloS one 11 (12), e0164540, 2016 | 25 | 2016 |
| Next generation sequencing reads comparison with an alignment-free distance E Weitschek, D Santoni, G Fiscon, MC De Cola, P Bertolazzi, G Felici BMC research notes 7, 1-13, 2014 | 24 | 2014 |
| Immunological network signatures of cancer progression and survival T Clancy, M Pedicini, F Castiglione, D Santoni, V Nygaard, TJ Lavelle, ... BMC medical genomics 4, 1-14, 2011 | 22 | 2011 |
| Identifying correlations between chromosomal proximity of genes and distance of their products in protein-protein interaction networks of yeast D Santoni, F Castiglione, P Paci PloS one 8 (3), e57707, 2013 | 21 | 2013 |
| In the search of potential epitopes for Wuhan seafood market pneumonia virus using high order nullomers D Santoni, D Vergni Journal of immunological methods 481, 112787, 2020 | 20 | 2020 |
| An integrated approach (cluster analysis integration method) to combine expression data and protein–protein interaction networks in agrigenomics: application on arabidopsis … D Santoni, A Swiercz, A Żmieńko, M Kasprzak, M Blazewicz, P Bertolazzi, ... Omics: A journal of integrative biology 18 (2), 155-165, 2014 | 18 | 2014 |
| Structural and functional analysis of hemoglobin and serum albumin through protein long-range interaction networks P Paci, L Di Paola, D Santoni, M De Ruvo, A Giuliani Current Proteomics 9 (3), 160-166, 2012 | 14 | 2012 |
| Sequence-dependent DNA torsional rigidity: a tetranucleotide code F Pedone, F Mazzei, D Santoni Biophysical chemistry 112 (1), 77-88, 2004 | 13 | 2004 |
| MicroRNAs as prime players in a combinatorial view of evolution D Cacchiarelli, D Santoni, I Bozzoni RNA biology 5 (3), 120-122, 2008 | 12 | 2008 |
| An entropy-based study on mutational trajectory of SARS-CoV-2 in India D Santoni, N Ghosh, I Saha Infection, Genetics and Evolution 97, 105154, 2022 | 10 | 2022 |
