| A structure-informed atlas of human-virus interactions G Lasso, SV Mayer, ER Winkelmann, T Chu, O Elliot, JA Patino-Galindo, ... Cell 178 (6), 1526-1541. e16, 2019 | 127 | 2019 |
| Comprehensive screening for naturally occurring hepatitis C virus resistance to direct-acting antivirals in the NS3, NS5A, and NS5B genes in worldwide isolates of viral … JÁ Patiño-Galindo, K Salvatierra, F González-Candelas, ... Antimicrobial agents and chemotherapy 60 (4), 2402-2416, 2016 | 59 | 2016 |
| Mutational and functional genetics mapping of chemotherapy resistance mechanisms in relapsed acute lymphoblastic leukemia K Oshima, J Zhao, P Pérez-Durán, JA Brown, JA Patiño-Galindo, T Chu, ... Nature cancer 1 (11), 1113-1127, 2020 | 45 | 2020 |
| Recombination and lineage-specific mutations linked to the emergence of SARS-CoV-2 JÁ Patiño-Galindo, I Filip, R Chowdhury, CD Maranas, PK Sorger, ... Genome Medicine 13, 1-14, 2021 | 43 | 2021 |
| The substitution rate of HIV-1 subtypes: a genomic approach JÁ Patiño-Galindo, F Gonzalez-Candelas Virus Evolution 3 (2), vex029, 2017 | 41 | 2017 |
| Global patterns of recombination across human viruses JÁ Patiño-Galindo, I Filip, R Rabadan Molecular biology and evolution 38 (6), 2520-2531, 2021 | 33 | 2021 |
| The molecular epidemiology of HIV-1 in the Comunidad Valenciana (Spain): analysis of transmission clusters JÁ Patiño-Galindo, M Torres-Puente, MA Bracho, I Alastrué, A Juan, ... Scientific reports 7 (1), 11584, 2017 | 25 | 2017 |
| Tropical sufficient statistics for persistent homology A Monod, S Kalisnik, JÁ Patino-Galindo, L Crawford SIAM Journal on Applied Algebra and Geometry 3 (2), 337-371, 2019 | 18 | 2019 |
| Expansion of the CRF19_cpx variant in Spain JAP Galindo, M Torres-Puente, C Gimeno, E Ortega, D Navarro, ... Journal of Clinical Virology 69, 146-149, 2015 | 18 | 2015 |
| Oncogenic Vav1-Myo1f induces therapeutically targetable macrophage-rich tumor microenvironment in peripheral T cell lymphoma JR Cortes, I Filip, R Albero, JA Patiño-Galindo, SA Quinn, WHW Lin, ... Cell reports 39 (3), 2022 | 17 | 2022 |
| Transmission dynamics of HIV-1 subtype B in the Basque Country, Spain JA Patiño-Galindo, MM Thomson, L Pérez-Álvarez, E Delgado, ... Infection, Genetics and Evolution 40, 91-97, 2016 | 14 | 2016 |
| Comparative analysis of variation and selection in the HCV genome JÁ Patiño-Galindo, F González-Candelas Infection, Genetics and Evolution 49, 104-110, 2017 | 13 | 2017 |
| Identification of a large, fast-expanding HIV-1 subtype B transmission cluster among MSM in Valencia, Spain JÁ Patiño-Galindo, M Torres-Puente, MA Bracho, I Alastrue, A Juan, ... PLoS One 12 (2), e0171062, 2017 | 11 | 2017 |
| Recombination and convergent evolution led to the emergence of 2019 Wuhan coronavirus JÁ Patiño-Galindo, I Filip, M AlQuraishi, R Rabadan bioRxiv, 1-13, 2020 | 9 | 2020 |
| The effect of RNA substitution models on viroid and RNA virus phylogenies JÁ Patino-Galindo, F González-Candelas, OG Pybus Genome Biology and Evolution 10 (2), 657-666, 2018 | 9 | 2018 |
| Topological data analysis identifies emerging adaptive mutations in SARS-CoV-2 M Bleher, L Hahn, M Neumann, JA Patino-Galindo, M Carriere, U Bauer, ... arXiv preprint arXiv:2106.07292, 2021 | 8 | 2021 |
| Changes in a new type of genomic accordion may open the pallets to increased monkeypox transmissibility S Monzón, S Varona, A Negredo, JA Patiño-Galindo, S Vidal-Freire, ... bioRxiv, 2022.09. 30.510261, 2022 | 7 | 2022 |
| Population genomics of human viruses F González-Candelas, JÁ Patiño-Galindo, C Valiente-Mullor Population Genomics: Microorganisms, 267-296, 2019 | 5 | 2019 |
| Genome-scale analysis of evolutionary rate and selection in a fast-expanding Spanish cluster of HIV-1 subtype F1 JÁ Patiño-Galindo, F Domínguez, MT Cuevas, E Delgado, M Sánchez, ... Infection, Genetics and Evolution 66, 43-47, 2018 | 4 | 2018 |
| Molecular evolution methods to study HIV-1 epidemics JÁ Patiño-Galindo, F González-Candelas Future Virology 13 (6), 399-404, 2018 | 3 | 2018 |
