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Jeffery B. Klauda
Jeffery B. Klauda
Professor of Chemical Engineering, University of Maryland
在 umd.edu 的电子邮件经过验证 - 首页
标题
引用次数
引用次数
年份
Update of the CHARMM all-atom additive force field for lipids: validation on six lipid types
JB Klauda, RM Venable, JA Freites, JW O’Connor, DJ Tobias, ...
The journal of physical chemistry B 114 (23), 7830-7843, 2010
41562010
CHARMM-GUI input generator for NAMD, GROMACS, AMBER, OpenMM, and CHARMM/OpenMM simulations using the CHARMM36 additive force field
J Lee, X Cheng, S Jo, AD MacKerell, JB Klauda, W Im
Biophysical journal 110 (3), 641a, 2016
29992016
CHARMM‐GUI Membrane Builder toward realistic biological membrane simulations
EL Wu, X Cheng, S Jo, H Rui, KC Song, EM Dávila‐Contreras, Y Qi, J Lee, ...
Journal of computational chemistry 35 (27), 1997-2004, 2014
20132014
CHARMM-GUI Membrane Builder for mixed bilayers and its application to yeast membranes
S Jo, JB Lim, JB Klauda, W Im
Biophysical journal 97 (1), 50-58, 2009
15222009
Global distribution of methane hydrate in ocean sediment
JB Klauda, SI Sandler
Energy & Fuels 19 (2), 459-470, 2005
7162005
CHARMM-GUI Membrane Builder for Complex Biological Membrane Simulations with Glycolipids and Lipoglycans
J Lee, DS Patel, J Ståhle, SJ Park, NR Kern, S Kim, J Lee, X Cheng, ...
Journal of chemical theory and computation 15 (1), 775-786, 2018
4272018
An ab initio study on the torsional surface of alkanes and its effect on molecular simulations of alkanes and a DPPC bilayer
JB Klauda, BR Brooks, AD MacKerell, RM Venable, RW Pastor
The journal of physical chemistry B 109 (11), 5300-5311, 2005
3522005
A fugacity model for gas hydrate phase equilibria
JB Klauda, SI Sandler
Industrial & engineering chemistry research 39 (9), 3377-3386, 2000
3522000
Simulation-based methods for interpreting x-ray data from lipid bilayers
JB Klauda, N Kučerka, BR Brooks, RW Pastor, JF Nagle
Biophysical journal 90 (8), 2796-2807, 2006
2532006
Phase behavior of clathrate hydrates: a model for single and multiple gas component hydrates
JB Klauda, SI Sandler
Chemical Engineering Science 58 (1), 27-41, 2003
2292003
Update of the cholesterol force field parameters in CHARMM
JB Lim, B Rogaski, JB Klauda
The Journal of Physical Chemistry B 116 (1), 203-210, 2012
2252012
CHARMM all-atom additive force field for sphingomyelin: elucidation of hydrogen bonding and of positive curvature
RM Venable, AJ Sodt, B Rogaski, H Rui, E Hatcher, AD MacKerell, ...
Biophysical journal 107 (1), 134-145, 2014
2172014
Molecular dynamics and NMR spectroscopy studies of E. coli lipopolysaccharide structure and dynamics
EL Wu, O Engström, S Jo, D Stuhlsatz, MS Yeom, JB Klauda, G Widmalm, ...
Biophysical journal 105 (6), 1444-1455, 2013
1932013
CHARMM36 united atom chain model for lipids and surfactants
S Lee, A Tran, M Allsopp, JB Lim, J Hénin, JB Klauda
The journal of physical chemistry B 118 (2), 547-556, 2014
1882014
Improving the CHARMM force field for polyunsaturated fatty acid chains
JB Klauda, V Monje, T Kim, W Im
The journal of physical chemistry B 116 (31), 9424-9431, 2012
1722012
E. coli outer membrane and interactions with OmpLA
EL Wu, PJ Fleming, MS Yeom, G Widmalm, JB Klauda, KG Fleming, W Im
Biophysical journal 106 (11), 2493-2502, 2014
1692014
CHARMMing: a new, flexible web portal for CHARMM
BT Miller, RP Singh, JB Klauda, M Hodoscek, BR Brooks, HL Woodcock Iii
Journal of chemical information and modeling 48 (9), 1920-1929, 2008
1502008
Cholesterol flip-flop: insights from free energy simulation studies
S Jo, H Rui, JB Lim, JB Klauda, W Im
The Journal of Physical Chemistry B 114 (42), 13342-13348, 2010
1422010
Dynamical motions of lipids and a finite size effect in simulations of bilayers
JB Klauda, BR Brooks, RW Pastor
The Journal of chemical physics 125 (14), 2006
1422006
Modeling gas hydrate phase equilibria in laboratory and natural porous media
JB Klauda, SI Sandler
Industrial & engineering chemistry research 40 (20), 4197-4208, 2001
1312001
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