Let-7 family of microRNA is required for maturation and adult-like metabolism in stem cell-derived cardiomyocytes KT Kuppusamy, DC Jones, H Sperber, A Madan, KA Fischer, ... Proceedings of the National Academy of Sciences 112 (21), E2785-E2794, 2015 | 286 | 2015 |
Compression of next-generation sequencing reads aided by highly efficient de novo assembly DC Jones, WL Ruzzo, X Peng, MG Katze Nucleic acids research 40 (22), e171-e171, 2012 | 232 | 2012 |
Metabolic control over mTOR-dependent diapause-like state AM Hussein, Y Wang, J Mathieu, L Margaretha, C Song, DC Jones, ... Developmental cell 52 (2), 236-250. e7, 2020 | 98 | 2020 |
Inhibition of β-catenin signaling respecifies anterior-like endothelium into beating human cardiomyocytes NJ Palpant, L Pabon, M Roberts, B Hadland, D Jones, C Jones, RT Moon, ... Development 142 (18), 3198-3209, 2015 | 79 | 2015 |
A new approach to bias correction in RNA-Seq DC Jones, WL Ruzzo, X Peng, MG Katze Bioinformatics 28 (7), 921-928, 2012 | 46 | 2012 |
Chromatin and transcriptional analysis of mesoderm progenitor cells identifies HOPX as a regulator of primitive hematopoiesis NJ Palpant, Y Wang, B Hadland, RJ Zaunbrecher, M Redd, D Jones, ... Cell reports 20 (7), 1597-1608, 2017 | 40 | 2017 |
Isolator: accurate and stable analysis of isoform-level expression in RNA-Seq experiments DC Jones, KT Kuppusamy, NJ Palpant, X Peng, CE Murry, ... BioRxiv, 088765, 2016 | 8 | 2016 |
Assessment and improvement of Indian‐origin rhesus macaque and M auritian‐origin cynomolgus macaque genome annotations using deep transcriptome sequencing data X Peng, L Pipes, H Xiong, RR Green, DC Jones, WL Ruzzo, GP Schroth, ... Journal of medical primatology 43 (5), 317-328, 2014 | 5 | 2014 |
Characterization of immunosuppressive myeloid cells in Merkel cell carcinoma: correlation with resistance to PD-1 pathway blockade S Tabachnick-Cherny, T Pulliam, HJ Rodriguez, X Fan, DS Hippe, ... Clinical Cancer Research 30 (6), 1189-1199, 2024 | 2 | 2024 |
An information theoretic approach to detecting spatially varying genes DC Jones, P Danaher, Y Kim, JM Beechem, R Gottardo, EW Newell Cell Reports Methods 3 (6), 2023 | 2 | 2023 |
Polee: RNA-Seq analysis using approximate likelihood DC Jones, WL Ruzzo NAR Genomics and Bioinformatics 3 (2), lqab046, 2021 | 2 | 2021 |
Cell Simulation as Cell Segmentation DC Jones, AE Elz, A Hadadianpour, H Ryu, DR Glass, EW Newell bioRxiv, 2024 | 1 | 2024 |
Spatial-resolved single-cell analysis of the tumor microenvironment in Alaska Native colorectal cancer patients H Yin, D Redwood, K Smythe, D Jones, MG Houghton, KC Barry, ... Cancer Research 84 (6_Supplement), 3423-3423, 2024 | | 2024 |
173 Deciphering the tumor microenvironment of renal cell carcinoma: integrating single-cell sequencing and In Situ spatial transcriptomics for comprehensive characterization of … H Ryu, D Glass, A Hadadianpour, DC Jones, LT Nguyen, E Moelhman, ... Journal for ImmunoTherapy of Cancer 11 (Suppl 1), 2023 | | 2023 |
567 Merkel cell carcinomas are infiltrated by tumor-associated macrophages that counteract intratumoral CD8 T-cell benefit and correlate with resistence to PD-1 pathway blockade S Tabachnick-Cherny, T Pulliam, HR Chevez, X Fan, DS Hippe, ... Journal for ImmunoTherapy of Cancer 11 (Suppl 1), 2023 | | 2023 |
Assessing and Adjusting for Technical Bias in High Throughput Sequencing Data D Jones | | 2022 |
The analysis of RNA-Seq experiments using approximate likelihood DC Jones University of Washington, 2020 | | 2020 |
Utilising The E-Handover System As Part Of The Junior Internship Programme And Incorporating It Into The General Surgery Module For Final Year Medical Students D Jones, N Donlon, K Barry IRISH JOURNAL OF MEDICAL SCIENCE 187, S68-S68, 2018 | | 2018 |
Analyzing the Morphology of 3T3 Fibroblasts in Microenvironment K Lin, W Hong, W Lin, D Camarillo, D Jones Biophysical Journal 100 (3), 624a, 2011 | | 2011 |
Large eddy, small eddy: supplying recruits to the South Florida ecosystem [abstract]; Giros grandes, giros pequenos-proveen reclutas al ecosistema del sur de la Florida [resumen] C Yeung, J Lamkin, D Jones, M Criales, W Richards | | 2004 |