Single-cell and metagenomic analyses indicate a fermentative and saccharolytic lifestyle for members of the OP9 lineage JA Dodsworth, PC Blainey, SK Murugapiran, WD Swingley, CA Ross, ... Nature communications 4 (1), 1854, 2013 | 205 | 2013 |
Phylogeny and physiology of candidate phylum ‘Atribacteria’(OP9/JS1) inferred from cultivation-independent genomics MK Nobu, JA Dodsworth, SK Murugapiran, C Rinke, EA Gies, G Webster, ... The ISME journal 10 (2), 273-286, 2016 | 179 | 2016 |
Impact of single-cell genomics and metagenomics on the emerging view of extremophile “microbial dark matter” BP Hedlund, JA Dodsworth, SK Murugapiran, C Rinke, T Woyke Extremophiles 18, 865-875, 2014 | 146 | 2014 |
Temperature impacts community structure and function of phototrophic Chloroflexi and Cyanobacteria in two alkaline hot springs in Yellowstone National Park AC Bennett, SK Murugapiran, TL Hamilton Environmental microbiology reports 12 (5), 503-513, 2020 | 66 | 2020 |
Uncultivated thermophiles: current status and spotlight on ‘Aigarchaeota’ BP Hedlund, SK Murugapiran, TW Alba, A Levy, JA Dodsworth, GB Goertz, ... Current Opinion in Microbiology 25, 136-145, 2015 | 58 | 2015 |
Thermoflexus hugenholtzii gen. nov., sp. nov., a thermophilic, microaerophilic, filamentous bacterium representing a novel class in the Chloroflexi, Thermoflexia classis nov., and … JA Dodsworth, J Gevorkian, F Despujos, JK Cole, SK Murugapiran, ... International journal of systematic and evolutionary microbiology 64 (Pt_6 …, 2014 | 57 | 2014 |
Localized high abundance of Marine Group II archaea in the subtropical Pearl River Estuary: implications for their niche adaptation W Xie, H Luo, SK Murugapiran, JA Dodsworth, S Chen, Y Sun, ... Environmental microbiology 20 (2), 734-754, 2018 | 52 | 2018 |
Exploring microbial dark matter to resolve the deep archaeal ancestry of eukaryotes JH Saw, A Spang, K Zaremba-Niedzwiedzka, L Juzokaite, JA Dodsworth, ... Philosophical Transactions of the Royal Society B: Biological Sciences 370 …, 2015 | 50 | 2015 |
Pyrosequencing Reveals High-Temperature Cellulolytic Microbial Consortia in Great Boiling Spring after In Situ Lignocellulose Enrichment JP Peacock, JK Cole, SK Murugapiran, JA Dodsworth, JC Fisher, ... PLoS One 8 (3), e59927, 2013 | 49 | 2013 |
Thermus oshimai JL-2 and T. thermophilus JL-18 genome analysis illuminates pathways for carbon, nitrogen, and sulfur cycling SK Murugapiran, M Huntemann, CL Wei, J Han, JC Detter, C Han, ... Standards in genomic sciences 7, 449-468, 2013 | 46 | 2013 |
Lateral gene transfer of family A DNA polymerases between thermophilic viruses, aquificae, and apicomplexa TW Schoenfeld, SK Murugapiran, JA Dodsworth, S Floyd, M Lodes, ... Molecular biology and evolution 30 (7), 1653-1664, 2013 | 45 | 2013 |
Molecular modeling of the reductase domain to elucidate the reaction mechanism of reduction of peptidyl thioester into its corresponding alcohol in non-ribosomal peptide … B Manavalan, SK Murugapiran, G Lee, S Choi BMC Structural Biology 10, 1-14, 2010 | 37 | 2010 |
Effect of the synthetic bile salt analog CamSA on the hamster model of Clostridium difficile infection A Howerton, CO Seymour, SK Murugapiran, Z Liao, JR Phan, A Estrada, ... Antimicrobial agents and chemotherapy 62 (10), 10.1128/aac. 02251-17, 2018 | 29 | 2018 |
Single-cell-genomics-facilitated read binning of candidate phylum EM19 genomes from geothermal spring metagenomes ED Becraft, JA Dodsworth, SK Murugapiran, JI Ohlsson, BR Briggs, ... Applied and environmental microbiology 82 (4), 992-1003, 2016 | 27 | 2016 |
Whole genome sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, incomplete denitrifiers from the United States Great Basin SK Murugapiran, M Huntemann, CL Wei, J Han, JC Detter, CS Han, ... Genome announcements 1 (1), 10.1128/genomea. 00106-12, 2013 | 27 | 2013 |
Anoxygenic phototrophs span geochemical gradients and diverse morphologies in terrestrial geothermal springs TL Hamilton, AC Bennett, SK Murugapiran, JR Havig Msystems 4 (6), 10.1128/msystems. 00498-19, 2019 | 24 | 2019 |
Substituted lactam and cyclic azahemiacetals modulate Pseudomonas aeruginosa quorum sensing VLA Malladi, AJ Sobczak, N Maricic, SK Murugapiran, L Schneper, ... Bioorganic & medicinal chemistry 19 (18), 5500-5506, 2011 | 23 | 2011 |
Distribution and genomic variation of thermophilic cyanobacteria in diverse microbial mats at the upper temperature limits of photosynthesis ED Kees, SK Murugapiran, AC Bennett, TL Hamilton Msystems 7 (5), e00317-22, 2022 | 22 | 2022 |
LTQ-XL mass spectrometry proteome analysis expands the Pseudomonas aeruginosa AmpR regulon to include cyclic di-GMP phosphodiesterases and phosphoproteins, and identifies novel … H Kumari, SK Murugapiran, D Balasubramanian, L Schneper, M Merighi, ... Journal of proteomics 96, 328-342, 2014 | 21 | 2014 |
Thermus sediminis sp. nov., a thiosulfate-oxidizing and arsenate-reducing organism isolated from Little Hot Creek in the Long Valley Caldera, California EM Zhou, WD Xian, CC Mefferd, SC Thomas, AL Adegboruwa, N Williams, ... Extremophiles 22, 983-991, 2018 | 18 | 2018 |