| Combining metagenomics, metatranscriptomics and viromics to explore novel microbial interactions: towards a systems-level understanding of human microbiome S Bikel, A Valdez-Lara, F Cornejo-Granados, K Rico, ... Computational and structural biotechnology journal 13, 390-401, 2015 | 265 | 2015 |
| Microbiome of Pacific Whiteleg shrimp reveals differential bacterial community composition between Wild, Aquacultured and AHPND/EMS outbreak conditions F Cornejo-Granados, AA Lopez-Zavala, L Gallardo-Becerra, ... Scientific reports 7 (1), 11783, 2017 | 260 | 2017 |
| A meta-analysis reveals the environmental and host factors shaping the structure and function of the shrimp microbiota F Cornejo-Granados, L Gallardo-Becerra, M Leonardo-Reza, ... PeerJ 6, e5382, 2018 | 118 | 2018 |
| Metatranscriptomic analysis to define the Secrebiome, and 16S rRNA profiling of the gut microbiome in obesity and metabolic syndrome of Mexican children L Gallardo-Becerra, F Cornejo-Granados, R García-López, A Valdez-Lara, ... Microbial cell factories 19, 1-18, 2020 | 95 | 2020 |
| Demographic history and biologically relevant genetic variation of Native Mexicans inferred from whole-genome sequencing S Romero-Hidalgo, A Ochoa-Leyva, A Garcíarrubio, V Acuña-Alonzo, ... Nature communications 8 (1), 1005, 2017 | 66 | 2017 |
| Doing more with less: a comparison of 16S hypervariable regions in search of defining the shrimp microbiota R García-López, F Cornejo-Granados, AA Lopez-Zavala, ... Microorganisms 8 (1), 134, 2020 | 58 | 2020 |
| OTUs and ASVs Produce Comparable Taxonomic and Diversity from Shrimp Microbiota 16S Profiles Using Tailored Abundance Filters R García-López, F Cornejo-Granados, AA Lopez-Zavala, A Cota-Huízar, ... Genes 12 (4), 564, 2021 | 32 | 2021 |
| Gut dsDNA virome shows diversity and richness alterations associated with childhood obesity and metabolic syndrome S Bikel, G López-Leal, F Cornejo-Granados, L Gallardo-Becerra, ... Iscience 24 (8), 2021 | 30 | 2021 |
| Secretome Prediction of Two M. tuberculosis Clinical Isolates Reveals Their High Antigenic Density and Potential Drug Targets F Cornejo-Granados, ZL Zatarain-Barrón, VA Cantu-Robles, ... Frontiers in microbiology 8, 128, 2017 | 27 | 2017 |
| Prebiotic agavin in juvenile totoaba, Totoaba macdonaldi diets, to relieve soybean meal‐induced enteritis: Growth performance, gut histology and microbiota JP Fuentes‐Quesada, F Cornejo‐Granados, JA Mata‐Sotres, ... Aquaculture Nutrition 26 (6), 2115-2134, 2020 | 23 | 2020 |
| Agavin induces beneficial microbes in the shrimp microbiota under farming conditions JP Ochoa-Romo, F Cornejo-Granados, AA Lopez-Zavala, MT Viana, ... Scientific Reports 12 (1), 6392, 2022 | 14 | 2022 |
| Secret-AAR: a web server to assess the antigenic density of proteins and homology search against bacterial and parasite secretome proteins F Cornejo-Granados, JM Hurtado-Ramírez, R Hernández-Pando, ... Genomics 111 (6), 1514-1516, 2019 | 13 | 2019 |
| Alterations of the gut microbiome associated to methane metabolism in Mexican children with obesity SM Murga-Garrido, YC Orbe-Orihuela, CE Diaz-Benitez, ... Children 9 (2), 148, 2022 | 12 | 2022 |
| Targeted RNA-Seq Reveals the M. tuberculosis Transcriptome from an In Vivo Infection Model F Cornejo-Granados, G López-Leal, DA Mata-Espinosa, J Barrios-Payán, ... Biology 10 (9), 848, 2021 | 12 | 2021 |
| Whole-genome of Mexican-crAssphage isolated from the human gut microbiome M Cervantes-Echeverría, E Equihua-Medina, F Cornejo-Granados, ... BMC Research Notes 11, 1-3, 2018 | 11 | 2018 |
| Profiling the immune response to Mycobacterium tuberculosis Beijing family infection: a perspective from the transcriptome CC María Irene, RC Juan Germán, LL Gamaliel, ME Dulce Adriana, ... Virulence 12 (1), 1689-1704, 2021 | 10 | 2021 |
| Association of Gut Microbiota with Dietary-dependent Childhood Obesity YC Orbe-Orihuela, EE Godoy-Lozano, A Lagunas-Martínez, ... Archives of Medical Research 53 (4), 407-415, 2022 | 9 | 2022 |
| Clinical and pathological characteristics associated with the presence of the IS6110 Mycobacterim tuberculosis transposon in neoplastic cells from non-small cell … O Arrieta, C Molina-Romero, F Cornejo-Granados, B Marquina-Castillo, ... Scientific Reports 12 (1), 2210, 2022 | 9 | 2022 |
| The Two-Faced Role of crAssphage Subfamilies in Obesity and Metabolic Syndrome: Between Good and Evil M Cervantes-Echeverría, L Gallardo-Becerra, F Cornejo-Granados, ... Genes 14 (1), 139, 2023 | 8 | 2023 |
| Virulence Factors of the Gut Microbiome Are Associated with BMI and Metabolic Blood Parameters in Children with Obesity SM Murga-Garrido, EJ Ulloa-Pérez, CE Díaz-Benítez, YC Orbe-Orihuela, ... Microbiology Spectrum 11 (2), e03382-22, 2023 | 7 | 2023 |
