PIPE: a protein-protein interaction prediction engine based on the re-occurring short polypeptide sequences between known interacting protein pairs S Pitre, F Dehne, A Chan, J Cheetham, A Duong, A Emili, M Gebbia, ... BMC bioinformatics 7, 1-15, 2006 | 237 | 2006 |
Mapping the functional yeast ABC transporter interactome J Snider, A Hanif, ME Lee, K Jin, AR Yu, C Graham, M Chuk, ... Nature chemical biology 9 (9), 565-572, 2013 | 103 | 2013 |
Global investigation of protein–protein interactions in yeast Saccharomyces cerevisiae using re-occurring short polypeptide sequences S Pitre, C North, M Alamgir, M Jessulat, A Chan, X Luo, JR Green, ... Nucleic acids research 36 (13), 4286-4294, 2008 | 86 | 2008 |
Chemical-genetic profile analysis of five inhibitory compounds in yeast M Alamgir, V Erukova, M Jessulat, A Azizi, A Golshani BMC chemical biology 10, 1-15, 2010 | 76 | 2010 |
Colony size measurement of the yeast gene deletion strains for functional genomics N Memarian, M Jessulat, J Alirezaie, N Mir-Rashed, J Xu, M Zareie, ... BMC bioinformatics 8, 1-11, 2007 | 75 | 2007 |
Antifungal and antioxidant activities of the phytomedicine pipsissewa, Chimaphila umbellata IJ Galván, N Mir-Rashed, M Jessulat, M Atanya, A Golshani, T Durst, ... Phytochemistry 69 (3), 738-746, 2008 | 65 | 2008 |
Short co-occurring polypeptide regions can predict global protein interaction maps S Pitre, M Hooshyar, A Schoenrock, B Samanfar, M Jessulat, JR Green, ... Scientific reports 2 (1), 239, 2012 | 62 | 2012 |
Interacting proteins Rtt109 and Vps75 affect the efficiency of non-homologous end-joining in Saccharomyces cerevisiae M Jessulat, M Alamgir, H Salsali, J Greenblatt, J Xu, A Golshani Archives of biochemistry and biophysics 469 (2), 157-164, 2008 | 56 | 2008 |
A map of human mitochondrial protein interactions linked to neurodegeneration reveals new mechanisms of redox homeostasis and NF-κB signaling RH Malty, H Aoki, A Kumar, S Phanse, S Amin, Q Zhang, Z Minic, ... Cell systems 5 (6), 564-577. e12, 2017 | 53 | 2017 |
Chemical-genetic profile analysis in yeast suggests that a previously uncharacterized open reading frame, YBR261C, affects protein synthesis M Alamgir, V Eroukova, M Jessulat, J Xu, A Golshani BMC genomics 9, 1-13, 2008 | 47 | 2008 |
Rewiring of the human mitochondrial interactome during neuronal reprogramming reveals regulators of the respirasome and neurogenesis MT Moutaoufik, R Malty, S Amin, Q Zhang, S Phanse, A Gagarinova, ... Iscience 19, 1114-1132, 2019 | 44 | 2019 |
Recent advances in protein–protein interaction prediction: experimental and computational methods M Jessulat, S Pitre, Y Gui, M Hooshyar, K Omidi, B Samanfar, LH Tan, ... Expert opinion on drug discovery 6 (9), 921-935, 2011 | 40 | 2011 |
A global investigation of gene deletion strains that affect premature stop codon bypass in yeast, Saccharomyces cerevisiae B Samanfar, K Shostak, F Chalabian, Z Wu, M Alamgir, N Sunba, ... Molecular Biosystems 10 (4), 916-924, 2014 | 38 | 2014 |
Mitochondrial targets for pharmacological intervention in human disease RH Malty, M Jessulat, K Jin, G Musso, J Vlasblom, S Phanse, Z Zhang, ... Journal of proteome research 14 (1), 5-21, 2015 | 37 | 2015 |
Rab5-family guanine nucleotide exchange factors bind retromer and promote its recruitment to endosomes BDM Bean, M Davey, J Snider, M Jessulat, V Deineko, M Tinney, ... Molecular biology of the cell 26 (6), 1119-1128, 2015 | 36 | 2015 |
Disruption of fungal cell wall by antifungal Echinacea extracts N Mir-Rashed, I Cruz, M Jessulat, M Dumontier, C Chesnais, NG Juliana, ... Medical mycology 48 (7), 949-958, 2010 | 31 | 2010 |
Spindle checkpoint factors Bub1 and Bub2 promote DNA double-strand break repair by nonhomologous end joining M Jessulat, RH Malty, DH Nguyen-Tran, V Deineko, H Aoki, J Vlasblom, ... Molecular and cellular biology, 2015 | 27 | 2015 |
Investigating the in vivo activity of the DeaD protein using protein–protein interactions and the translational activity of structured chloramphenicol acetyltransferase mRNAs G Butland, NJ Krogan, J Xu, WH Yang, H Aoki, JS Li, N Krogan, ... Journal of cellular biochemistry 100 (3), 642-652, 2007 | 27 | 2007 |
A comprehensive membrane interactome mapping of Sho1p reveals Fps1p as a novel key player in the regulation of the HOG pathway in S. cerevisiae MHY Lam, J Snider, M Rehal, V Wong, F Aboualizadeh, L Drecun, ... Journal of molecular biology 427 (11), 2088-2103, 2015 | 26 | 2015 |
Phosphatase complex Pph3/Psy2 is involved in regulation of efficient non-homologous end-joining pathway in the yeast Saccharomyces cerevisiae K Omidi, M Hooshyar, M Jessulat, B Samanfar, M Sanders, D Burnside, ... PloS one 9 (1), e87248, 2014 | 25 | 2014 |