| Macromolecular modeling and design in Rosetta: recent methods and frameworks JK Leman, BD Weitzner, SM Lewis, J Adolf-Bryfogle, N Alam, RF Alford, ... Nature Methods 17, 665–680, 2020 | 596 | 2020 |
| Targeting the CoREST complex with dual histone deacetylase and demethylase inhibitors JH Kalin, M Wu, AV Gomez, Y Song, J Das, D Hayward, N Adejola, M Wu, ... Nature communications 9 (1), 53, 2018 | 201 | 2018 |
| Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: A CASP‐CAPRI experiment MF Lensink, S Velankar, A Kryshtafovych, SY Huang, ... Proteins: Structure, Function, and Bioinformatics 84 (S1), 323–348, 2016 | 166 | 2016 |
| Small-molecule-induced polymerization triggers degradation of BCL6 M Słabicki, H Yoon, J Koeppel, L Nitsch, SS Roy Burman, C Di Genua, ... Nature, 1-5, 2020 | 164 | 2020 |
| Efficient Flexible Backbone Protein-Protein Docking for Challenging Targets NA Marze*, SS Roy Burman*, W Sheffler, JJ Gray Bioinformatics 34 (20), 3461–3469, 2018 | 136 | 2018 |
| Structural basis of regulated m7G tRNA modification by METTL1–WDR4 J Li, L Wang, Q Hahn, RP Nowak, T Viennet, EA Orellana, ... Nature 613 (7943), 391-397, 2023 | 35 | 2023 |
| Modeling oblong proteins and water-mediated interfaces with RosettaDock in CAPRI rounds 28–35 NA Marze, JR Jeliazkov, SS Roy Burman, SE Boyken, F DiMaio, JJ Gray Proteins: Structure, Function, and Bioinformatics 85 (3), 479-486, 2017 | 21 | 2017 |
| Novel sampling strategies and a coarse‐grained score function for docking homomers, flexible heteromers, and oligosaccharides using Rosetta in CAPRI Rounds 37‐45 SS Roy Burman, ML Nance, JR Jeliazkov, JW Labonte, JH Lubin, ... Proteins: Structure, Function, and Bioinformatics 88 (8), 973–985, 2020 | 18 | 2020 |
| Machine learning modeling of protein-intrinsic features predicts tractability of targeted protein degradation W Zhang*, SS Roy Burman*, J Chen, KA Donovan, Y Cao, C Shu, ... Genomics, Proteomics & Bioinformatics, 2022 | 17 | 2022 |
| Ensuring scientific reproducibility in bio-macromolecular modeling via extensive, automated benchmarks J Koehler Leman, S Lyskov, SM Lewis, J Adolf-Bryfogle, RF Alford, ... Nature communications 12 (1), 6947, 2021 | 16 | 2021 |
| Flexible backbone assembly and refinement of symmetrical homomeric complexes SS Roy Burman, RA Yovanno, JJ Gray Structure 27 (6), 1041–1051, 2019 | 16 | 2019 |
| PyRosetta Jupyter Notebooks Teach Biomolecular Structure Prediction and Design K Le, J Adolf-Bryfogle, J Klima, S Lyskov, J Labonte, S Bertolani, ... The Biophysicist 2 (1), 108-122, 2021 | 13 | 2021 |
| BTBBCL6 dimers as building blocks for reversible drug-induced protein oligomerization L Nitsch, P Jensen, H Yoon, J Koeppel, SSR Burman, ES Fischer, ... Cell Reports Methods 2 (4), 2022 | 7 | 2022 |
| Continuous evolution of compact protein degradation tags regulated by selective molecular glues JAM Mercer*, SJ DeCarlo*, SS Roy Burman*, V Sreekanth, AT Nelson, ... Science 383 (6688), eadk4422, 2024 | 4 | 2024 |
| The human E3 ligase RNF185 is a regulator of the SARS-CoV-2 envelope protein C Zou, H Yoon, PMC Park, JJ Patten, J Pellman, J Carreiro, JM Tsai, ... Iscience 26 (5), 2023 | 2 | 2023 |
| Targeting DCAF5 suppresses SMARCB1-mutant cancer by stabilizing SWI/SNF S Radko-Juettner, H Yue, JA Myers, RD Carter, AN Robertson, P Mittal, ... Nature 628, 442–449, 2024 | 1* | 2024 |
| Serological testing for SARS-CoV-2 antibodies of employees shows low transmission working in a cancer center JA Meyerhardt, H Yue, RP Nowak, L Brais, C Ma, S Johnson, J Harrod, ... Plos one 17 (4), e0266791, 2022 | 1 | 2022 |
| Efficient Flexible-Backbone Docking of Challenging Protein Complexes SS Roy Burman, NA Marze, W Sheffler, JJ Gray Biophysical Journal 114 (3), 344a, 2018 | 1 | 2018 |
| PROTEIN MARKER FOR INDUCING LIGAND-DEPENDENT DEGRADATION OF PROTEIN/PROTEIN FUSIONS ES Fischer, SSR Burman, T Faust, Y Hojong, RP Nowak | | 2023 |
| PROTEIN TAG TO INDUCE LIGAND DEPENDENT DEGRADATION OF PROTEIN/PROTEIN-FUSIONS ES Fischer, SS Roy Burman, T Faust, H Yoon, RP Nowak US Patent App. 17/642,874, 2022 | | 2022 |
Eric S FischerProfessor of Biological Chemistry and Molecular Pharmacology, Harvard Medical School在 crystal.harvard.edu 的电子邮件经过验证
