Transfer Learning in Magnetic Resonance Brain Imaging: A Systematic Review JM Valverde, V Imani, A Abdollahzadeh, R De Feo, M Prakash, R Ciszek, ... Journal of Imaging 7 (4), 66, 2021 | 97 | 2021 |
Automated 3D axonal morphometry of white matter A Abdollahzadeh, I Belevich, E Jokitalo, J Tohka, A Sierra Scientific reports 9 (1), 6084, 2019 | 71 | 2019 |
DeepACSON Automated Segmentation of White Matter in 3D Electron Microscopy A Abdollahzadeh, I Belevich, E Jokitalo, A Sierra, J Tohka Communications Biology 4, 179, 2021 | 34 | 2021 |
In vivo diffusion tensor imaging in acute and subacute phases of mild traumatic brain injury in rats ISM Molina, RA Salo, A Abdollahzadeh, J Tohka, O Gröhn, A Sierra Eneuro 7 (3), 2020 | 17 | 2020 |
3D axonal morphometry of white matter A Abdollahzadeh, I Belevich, E Jokitalo, J Tohka, A Sierra bioRxiv, 239228, 2018 | 14* | 2018 |
The role of the meningeal lymphatic system in local meningeal inflammation and trigeminal nociception N Mikhailov, A Virenque, K Koroleva, E Eme-Scolan, M Teleman, ... Scientific Reports 12 (1), 8804, 2022 | 13* | 2022 |
Multiscale imaging approach for studying the central nervous system: methodology and perspective M Fratini, A Abdollahzadeh, M DiNuzzo, RA Salo, L Maugeri, A Cedola, ... Frontiers in Neuroscience 14, 72, 2020 | 11 | 2020 |
gACSON software for automated segmentation and morphology analyses of myelinated axons in 3D electron microscopy A Behanova, A Abdollahzadeh, I Belevich, E Jokitalo, A Sierra, J Tohka Computer Methods and Programs in Biomedicine 220, 2022 | 10 | 2022 |
Cylindrical shape decomposition for 3D segmentation of tubular objects A Abdollahzadeh, A Sierra, J Tohka IEEE Access 9, 23979-23995, 2021 | 9 | 2021 |
Node of Ranvier remodeling in chronic psychosocial stress and anxiety MK Koskinen, M Laine, A Abdollahzadeh, A Gigliotta, G Mazzini, ... Neuropsychopharmacology 48 (10), 1532-1540, 2023 | 5 | 2023 |
SproutAngio: an open-source bioimage informatics tool for quantitative analysis of sprouting angiogenesis and lumen space M Beter, A Abdollahzadeh, HH Pulkkinen, H Huang, F Orsenigo, ... Scientific Reports 13 (1), 7279, 2023 | 5 | 2023 |
Steerable3D: An ImageJ plugin for neurovascular enhancement in 3-D segmentation P Miocchi, A Sierra, L Maugeri, E Stefanutti, A Abdollahzadeh, F Mangini, ... Physica Medica 81, 197-209, 2021 | 5 | 2021 |
BV-2 Microglial Cells Overexpressing C9orf72 Hexanucleotide Repeat Expansion Produce DPR Proteins and Show Normal Functionality but No RNA Foci H Rostalski, T Hietanen, S Leskelä, A Behánová, A Abdollahzadeh, ... Frontiers in neurology 11, 1172, 2020 | 5 | 2020 |
Volume electron microscopy in injured rat brain validates white matter microstructure metrics from diffusion MRI R Coronado-Leija, A Abdollahzadeh, HH Lee, S Coelho, B Ades-Aron, ... Imaging Neuroscience, 2024 | 2 | 2024 |
Characterization of white matter myelinated and unmyelinated axons from diffusion MRI perspective A Abdollahzadeh, R Coronado-Leija, S Mehrin, HH Lee, A Sierra, ... 31st Annual Meeting of the International Society for Magnetic Resonance in …, 2023 | 2 | 2023 |
Validation of diffusion MRI-derived white matter microstructure metrics using 3D electron microscopy in injured rat brain R Coronado-Leija, A Abdollahzadeh, HH Lee, S Coelho, RA Salo, ... ISMRM, 2022 | 2 | 2022 |
The effects of axonal beading and undulation on axonal diameter estimation from diffusion MRI: Insights from simulations in human axons segmented from three‐dimensional … HH Lee, Q Tian, M Sheft, R Coronado‐Leija, G Ramos‐Llorden, ... NMR in Biomedicine 37 (4), e5087, 2024 | 1 | 2024 |
Segmentation of white matter ultrastructures in 3D electron microscopy A Abdollahzadeh, I Belevich, E Jokitalo, J Tohka, A Sierra | 1 | 2021 |
Validation and application of soma and neurite density imaging (SANDI) for in vivo human brainstem nuclei atlasing M Bianciardi, MG García-Gomar, K Singh, M Guerreri, A Sierra, J Tohka, ... Proc. Int. Soc. Mag. Reson. Med 3210, 2020 | 1 | 2020 |
Cylindrical Shape Decomposition Algorithm for 3D Segmentation A Abdollahzadeh, A Sierra, J Tohka arXiv preprint arXiv:1911.00571, 2019 | 1 | 2019 |