Transcription factors orchestrate dynamic interplay between genome topology and gene regulation during cell reprogramming R Stadhouders, E Vidal, F Serra, B Di Stefano, F Le Dily, J Quilez, ... Nature genetics 50 (2), 238-249, 2018 | 336 | 2018 |
Three-dimensional genomic structure and cohesin occupancy correlate with transcriptional activity during spermatogenesis C Vara, A Paytuví-Gallart, Y Cuartero, F Le Dily, F Garcia, J Salvà-Castro, ... Cell reports 28 (2), 352-367. e9, 2019 | 128 | 2019 |
Restraint-based three-dimensional modeling of genomes and genomic domains F Serra, M Di Stefano, YG Spill, Y Cuartero, M Goodstadt, D Baù, ... FEBS letters 589 (20), 2987-2995, 2015 | 101 | 2015 |
Lamin B1 mapping reveals the existence of dynamic and functional euchromatin lamin B1 domains L Pascual-Reguant, E Blanco, S Galan, F Le Dily, Y Cuartero, ... Nature communications 9 (1), 3420, 2018 | 84 | 2018 |
Specific contributions of cohesin-SA1 and cohesin-SA2 to TADs and polycomb domains in embryonic stem cells A Cuadrado, D Giménez-Llorente, A Kojic, M Rodríguez-Corsino, ... Cell reports 27 (12), 3500-3510. e4, 2019 | 75 | 2019 |
OneD: increasing reproducibility of Hi-C samples with abnormal karyotypes E Vidal, F le Dily, J Quilez, R Stadhouders, Y Cuartero, T Graf, ... Nucleic acids research 46 (8), e49-e49, 2018 | 58 | 2018 |
Hormone-control regions mediate steroid receptor–dependent genome organization F Le Dily, E Vidal, Y Cuartero, J Quilez, AS Nacht, GP Vicent, ... Genome research 29 (1), 29-39, 2019 | 57 | 2019 |
Rapid reversible changes in compartments and local chromatin organization revealed by hyperosmotic shock R Amat, R Böttcher, F Le Dily, E Vidal, J Quilez, Y Cuartero, M Beato, ... Genome research 29 (1), 18-28, 2019 | 51 | 2019 |
The impact of chromosomal fusions on 3D genome folding and recombination in the germ line C Vara, A Paytuví-Gallart, Y Cuartero, L Álvarez-González, L Marín-Gual, ... Nature communications 12 (1), 2981, 2021 | 46 | 2021 |
STAG2 loss-of-function affects short-range genomic contacts and modulates the basal-luminal transcriptional program of bladder cancer cells L Richart, E Lapi, V Pancaldi, M Cuenca-Ardura, ECS Pau, ... Nucleic Acids Research 49 (19), 11005-11021, 2021 | 18 | 2021 |
Retromer Regulates Postendocytic Sorting of β‐Secretase in Polarized Madin–Darby Canine Kidney Cells Y Cuartero, M Mellado, A Capell, M Álvarez‐Dolado, M Verges Traffic 13 (10), 1393-1410, 2012 | 16 | 2012 |
Subcellular localisation of retromer in post‐endocytic pathways of polarised Madin–Darby canine kidney cells M Mellado, Y Cuartero, R Brugada, M Verges Biology of the Cell 106 (11), 377-393, 2014 | 15 | 2014 |
Principles of 3D chromosome folding and evolutionary genome reshuffling in mammals L Álvarez-González, C Arias-Sardá, L Montes-Espuña, L Marín-Gual, ... Cell reports 41 (12), 2022 | 13 | 2022 |
Parallel sequencing lives, or what makes large sequencing projects successful J Quilez, E Vidal, FL Dily, F Serra, Y Cuartero, R Stadhouders, T Graf, ... GigaScience 6 (11), gix100, 2017 | 7* | 2017 |
STAG2 loss-of-function affects short-range genomic contacts and modulates urothelial differentiation in bladder cancer cells L Richart, E Lapi, V Pancaldi, M Cuenca, E Carrillo-de-Santa Pau, ... bioRxiv, 2020.08. 06.240457, 2020 | 1 | 2020 |
OneD: increasing reproducibility of Hi-C samples with abnormal karyotypes E Vidal Ocabo, F Le Dily, J Quilez Oliete, R Stadhouders, Y Cuartero, ... Nucleic Acids Research. 2018; 46 (8): e49, 2018 | | 2018 |