Characterizing long COVID: deep phenotype of a complex condition RR Deer, MA Rock, N Vasilevsky, L Carmody, H Rando, AJ Anzalone, ... EBioMedicine 74, 2021 | 186 | 2021 |
Generalisable long COVID subtypes: findings from the NIH N3C and RECOVER programmes JT Reese, H Blau, E Casiraghi, T Bergquist, JJ Loomba, TJ Callahan, ... EBioMedicine 87, 2023 | 103 | 2023 |
NSAID use and clinical outcomes in COVID-19 patients: a 38-center retrospective cohort study JT Reese, B Coleman, L Chan, H Blau, TJ Callahan, L Cappelletti, ... Virology journal 19 (1), 84, 2022 | 35 | 2022 |
<? mode longauthoraffil?> The Human Phenotype Ontology in 2024: phenotypes around the world MA Gargano, N Matentzoglu, B Coleman, EB Addo-Lartey, ... Nucleic acids research 52 (D1), D1333-D1346, 2024 | 31 | 2024 |
Risk of new‐onset psychiatric sequelae of COVID‐19 in the early and late post‐acute phase B Coleman, E Casiraghi, H Blau, L Chan, MA Haendel, B Laraway, ... World Psychiatry 21 (2), 319, 2022 | 20 | 2022 |
A method for comparing multiple imputation techniques: a case study on the US national COVID cohort collaborative E Casiraghi, R Wong, M Hall, B Coleman, M Notaro, MD Evans, ... Journal of biomedical informatics 139, 104295, 2023 | 16* | 2023 |
Metformin is associated with reduced COVID-19 severity in patients with prediabetes LE Chan, E Casiraghi, B Laraway, B Coleman, H Blau, A Zaman, ... Diabetes research and clinical practice 194, 110157, 2022 | 14 | 2022 |
Ontologizing health systems data at scale: making translational discovery a reality TJ Callahan, AL Stefanski, JM Wyrwa, C Zeng, A Ostropolets, JM Banda, ... NPJ Digital Medicine 6 (1), 89, 2023 | 13 | 2023 |
Cyclooxygenase inhibitor use is associated with increased COVID-19 severity J Reese, B Coleman, L Chan, JC Tiffany, L Cappelletti, T Fontana, ... | 13 | 2021 |
Characterizing long COVID: Deep phenotype of a complex condition. eBioMedicine 74 RR Deer, MA Rock, N Vasilevsky, L Carmody, H Rando, AJ Anzalone, ... | 11 | 2021 |
Supervised learning with word embeddings derived from PubMed captures latent knowledge about protein kinases and cancer V Ravanmehr, H Blau, L Cappelletti, T Fontana, L Carmody, B Coleman, ... NAR Genomics and Bioinformatics 3 (4), lqab113, 2021 | 8 | 2021 |
Increased risk of psychiatric sequelae of COVID-19 is highest early in the clinical course B Coleman, E Casiraghi, H Blau, L Chan, M Haendel, B Laraway, ... MedRxiv, 2021 | 5 | 2021 |
Manifestations associated with post acute sequelae of SARS-CoV2 infection (PASC) predict diagnosis of new-onset psychiatric disease: findings from the NIH N3C and RECOVER studies B Coleman, E Casiraghi, TJ Callahan, H Blau, L Chan, B Laraway, ... medRxiv, 2022.07. 08.22277388, 2022 | 2 | 2022 |
A corpus of GA4GH Phenopackets: case-level phenotyping for genomic diagnostics and discovery D Danis, MJ Bamshad, Y Bridges, P Cacheiro, LC Carmody, JX Chong, ... medRxiv, 2024.05. 29.24308104, 2024 | 1 | 2024 |
Node-degree aware edge sampling mitigates inflated classification performance in biomedical random walk-based graph representation learning L Cappelletti, L Rekerle, T Fontana, P Hansen, E Casiraghi, V Ravanmehr, ... Bioinformatics Advances 4 (1), vbae036, 2024 | 1 | 2024 |
Delayed Onset Postsurgical Endophthalmitis B Coleman, B Coleman, J Jaeger Journal of the American Medical Directors Association 22 (3), B5, 2021 | 1 | 2021 |
Speech and language classification in the human phenotype ontology AT Morgan, B Coleman, AP Vogel, A McNeill, PN Robinson European Journal of Human Genetics, 1-4, 2024 | | 2024 |
Association of post-COVID phenotypic manifestations with new-onset psychiatric disease B Coleman, E Casiraghi, TJ Callahan, H Blau, LE Chan, B Laraway, ... Translational Psychiatry 14 (1), 246, 2024 | | 2024 |
Human Phenotype Ontology: Developing HPO Terms for Mood Disorders to Integrate Diverse Phenotypic Datasets B Coleman, P Robinson Biological Psychiatry 95 (10), S7-S8, 2024 | | 2024 |
The Human Phenotype Ontology in 2024: phenotypes around the world. P Talapova, MA Gargano, N Matentzoglu, B Coleman, EB Addo-Lartey, ... Nucleic Acids Research, Oxford University Press, 2023 | | 2023 |