| Evidence of disrupted rhombic lip development in the pathogenesis of Dandy–Walker malformation P Haldipur, S Bernardo, KA Aldinger, T Sivakumar, J Millman, ... Acta neuropathologica 142, 761-776, 2021 | 30 | 2021 |
| Single-nucleoid architecture reveals heterogeneous packaging of mitochondrial DNA RS Isaac, TW Tullius, KG Hansen, D Dubocanin, M Couvillion, ... Nature Structural & Molecular Biology 31 (3), 568-577, 2024 | 24 | 2024 |
| DNA-m6A calling and integrated long-read epigenetic and genetic analysis with fibertools A Jha, SC Bohaczuk, Y Mao, J Ranchalis, BJ Mallory, AT Min, MO Hamm, ... Genome Research 34 (11), 1976-1986, 2024 | 22 | 2024 |
| Identifying and quantifying isoforms from accurate full-length transcriptome sequencing reads with Mandalorion R Volden, KD Schimke, A Byrne, D Dubocanin, M Adams, C Vollmers Genome Biology 24 (1), 167, 2023 | 17 | 2023 |
| Single-molecule architecture and heterogeneity of human telomeric DNA and chromatin D Dubocanin, AE Sedeno Cortes, J Ranchalis, T Real, B Mallory, ... BioRxiv, 2022.05. 09.491186, 2022 | 12 | 2022 |
| Single-molecule chromatin configurations link transcription factor binding to expression in human cells BR Doughty, MM Hinks, JM Schaepe, GK Marinov, AR Thurm, ... bioRxiv, 2024 | 10 | 2024 |
| Conservation of dichromatin organization along regional centromeres D Dubocanin, GA Hartley, AES Cortes, Y Mao, S Hedouin, J Ranchalis, ... BioRxiv, 2023.04. 20.537689, 2023 | 8 | 2023 |
| RNA polymerases reshape chromatin architecture and couple transcription on individual fibers TW Tullius, RS Isaac, D Dubocanin, J Ranchalis, LS Churchman, ... Molecular Cell 84 (17), 3209-3222. e5, 2024 | 5 | 2024 |
| Single-molecule states link transcription factor binding to gene expression BR Doughty, MM Hinks, JM Schaepe, GK Marinov, AR Thurm, ... Nature, 1-10, 2024 | 3 | 2024 |
| RNA polymerases reshape chromatin and coordinate transcription on individual fibers TW Tullius, RS Isaac, J Ranchalis, D Dubocanin, LS Churchman, ... bioRxiv, 2023 | 3 | 2023 |
| Mapping enhancer-gene regulatory interactions from single-cell data MU Sheth, WL Qiu, XR Ma, AR Gschwind, E Jagoda, AS Tan, H Einarsson, ... bioRxiv, 2024.11. 23.624931, 2024 | 1 | 2024 |
| Centromeric transposable elements and epigenetic status drive karyotypic variation in the eastern hoolock gibbon GA Hartley, M Okhovat, SJ Hoyt, E Fuller, N Pauloski, N Alexandre, ... bioRxiv, 2024 | | 2024 |
| Human Satellite 3 DNA encodes megabase-scale transcription factor binding platforms JM Franklin, D Dubocanin, C Chittenden, AG Barillas, RJ Lee, RP Ghosh, ... bioRxiv, 2024.10. 22.616524, 2024 | | 2024 |
| P317: Gene therapy base editors reshape single-molecule chromatin architecture of γ-globin promoters S Bohaczuk, C Li, D Dubocanin, B Mallory, M Vollger, A Lieber, ... Genetics in Medicine Open 1 (1), 2023 | | 2023 |
| Comparative Analysis of Long-Read Transcriptome Assembly Pipelines D Dubocanin University of California, Santa Cruz, 2020 | | 2020 |
