| Probing TDP-43 condensation using an in silico designed aptamer E Zacco, O Kantelberg, E Milanetti, A Armaos, FP Panei, J Gregory, ... Nature Communications 13 (1), 3306, 2022 | 26 | 2022 |
| HARIBOSS: a curated database of RNA-small molecules structures to aid rational drug design FP Panei, R Torchet, H Menager, P Gkeka, M Bonomi Bioinformatics 38 (17), 4185-4193, 2022 | 17 | 2022 |
| Identifying small-molecules binding sites in RNA conformational ensembles with SHAMAN FP Panei, P Gkeka, M Bonomi Nature Communications 15 (1), 5725, 2024 | 8 | 2024 |
| SHAMAN: A mixed solvent molecular dynamics protocol to identify small-molecules binding sites on RNA structural ensembles FP Panei, P Gkeka, M Bonomi Biophysical Journal 122 (3), 422a, 2023 | 1 | 2023 |
| Synchronized motion of interface residues for evaluating protein–RNA complex binding affinity: Application to aptamer‐mediated inhibition of TDP‐43 aggregates FP Panei, L Di Rienzo, E Zacco, A Armaos, GG Tartaglia, G Ruocco, ... Protein Science 33 (12), e5201, 2024 | | 2024 |
| Determining accurate conformational ensembles of intrinsically disordered proteins at atomic resolution K Borthakur, TR Sisk, FP Panei, M Bonomi, P Robustelli bioRxiv, 2024 | | 2024 |
| Advanced computational techniques to aid the rational design of small molecules targeting RNA FP Panei Sorbonne Université, 2024 | | 2024 |
| Towards accurate, force field independent conformational ensembles of intrinsically disordered proteins K Borthakur, TR Sisk, FP Panei, M Bonomi, P Robustelli bioRxiv, 2024.10. 04.616700, 2024 | | 2024 |
| An online database of RNA-small molecules complexes for rational drug design FP Panei, P Gkeka, M Bonomi Biophysical Journal 121 (3), 208a, 2022 | | 2022 |
