| STRONG: metagenomics strain resolution on assembly graphs C Quince, S Nurk, S Raguideau, R James, OS Soyer, JK Summers, ... Genome biology 22, 1-34, 2021 | 103 | 2021 |
| Biosynthetic potential of uncultured Antarctic soil bacteria revealed through long-read metagenomic sequencing V Waschulin, C Borsetto, R James, KK Newsham, S Donadio, C Corre, ... The ISME journal 16 (1), 101-111, 2022 | 92 | 2022 |
| High-quality metagenome assembly from long accurate reads with metaMDBG G Benoit, S Raguideau, R James, AM Phillippy, R Chikhi, C Quince Nature Biotechnology, 1-6, 2024 | 27 | 2024 |
| Efficient high-quality metagenome assembly from long accurate reads using minimizer-space de Bruijn graphs G Benoit, S Raguideau, R James, AM Phillippy, R Chikhi, C Quince bioRxiv, 2023 | 8 | 2023 |
| Food availability and population structure: How do clumped and abundant sources of carrion affect the genetic diversity of the black‐backed jackal? RS James, DM Scott, RW Yarnell, ADJ Overall Journal of Zoology 301 (3), 184-192, 2017 | 8 | 2017 |
| Characterization of six cross-species microsatellite markers suitable for estimating the population parameters of the black-backed jackal (Canis mesomelas) using … RS James, PL James, DM Scott, ADJ Overall Cogent Biology 1 (1), 1108479, 2015 | 3 | 2015 |
| Impact of trimethoprim on the river microbiome and antimicrobial resistance J Delaney, S Raguideau, J Holden, L Zhang, HJ Tipper, GL Hill, ... bioRxiv, 2020.06. 05.133348, 2020 | 2 | 2020 |
| LAMBDR: Long-range amplification and Nanopore sequencing of the Mycobacterium bovis direct-repeat region. A novel method for in-silico spoligotyping of M. bovis directly from … RS James, ER Travis, AD Millard, PC Hewlett, L Kravar-Garde, ... bioRxiv, 791129, 2019 | 1 | 2019 |
| Soil Metagenome ONT RS James, G Benoit, S Raguideau, G Alabone, C Quince | | 2024 |
| STRONG: metagenomics strain resolution on assembly graphs A Limasset, C Quince, S Nurk, S Raguideau, R James, O Soyer, ... Genome Biology 22 (1), 2021 | | 2021 |
| Additional file 2 of STRONG: metagenomics strain resolution on assembly graphs C Quince, S Nurk, S Raguideau, R James, OS Soyer, JK Summers, ... (No Title), 2021 | | 2021 |
| Genetic characterisation of a large antibiotic resistant environmental ST131 E. coli plasmid using a long read hybrid assembly approach RS James, S Rangama, V Clark, EMH Wellington bioRxiv, 2020.06. 16.155663, 2020 | | 2020 |
| LAMBDR: Long-range amplification and Nanopore sequencing of theMycobacterium bovis direct-repeat region. A novel method for in-silico spoligotyping ofM. bovisdirectly from … R James, E Travis, AD Millard, P Hewlett, L Kravar-Garde, E Wellington | | 2019 |
| Environmental Reservoirs of Antibiotic Resistance Genes-Can We Get the Genie Back in the Bottle? JM Holden, R James, G Hill, S Rangama, ID Lidbury, V Clark, ... 한국미생물학회 학술대회논문집, 28-28, 2018 | | 2018 |
