CEMiTool: a Bioconductor package for performing comprehensive modular co-expression analyses PST Russo, GR Ferreira, LE Cardozo, MC Bürger, R Arias-Carrasco, ... BMC bioinformatics 19, 1-13, 2018 | 254 | 2018 |
Genomic positional conservation identifies topological anchor point RNAs linked to developmental loci PP Amaral, T Leonardi, N Han, E Viré, DK Gascoigne, R Arias-Carrasco, ... Genome biology 19, 1-21, 2018 | 130 | 2018 |
Long non-coding RNAs responsive to salt and boron stress in the hyper-arid Lluteno maize from Atacama Desert W Huanca-Mamani, R Arias-Carrasco, S Cardenas-Ninasivincha, ... Genes 9 (3), 170, 2018 | 62 | 2018 |
Genome-wide circulating microRNA expression profiling reveals potential biomarkers for amyotrophic lateral sclerosis JM Matamala, R Arias-Carrasco, C Sanchez, M Uhrig, L Bargsted, ... Neurobiology of Aging 64, 123-138, 2018 | 60 | 2018 |
StructRNAfinder: an automated pipeline and web server for RNA families prediction R Arias-Carrasco, Y Vásquez-Morán, HI Nakaya, V Maracaja-Coutinho BMC bioinformatics 19, 1-7, 2018 | 40 | 2018 |
LeishDB: a database of coding gene annotation and non-coding RNAs in Leishmania braziliensis F Torres, R Arias-Carrasco, JC Caris-Maldonado, A Barral, ... Database 2017, bax047, 2017 | 25 | 2017 |
OUTBREAK: a user-friendly georeferencing online tool for disease surveillance R Arias-Carrasco, J Giddaluru, LE Cardozo, F Martins, ... Biological Research 54, 1-6, 2021 | 10 | 2021 |
Core non-coding RNAs of Piscirickettsia salmonis C Segovia, R Arias-Carrasco, AJ Yanez, V Maracaja-Coutinho, ... PLoS One 13 (5), e0197206, 2018 | 8 | 2018 |
Novel molecular insights and public omics data in pulmonary hypertension C Lopez-Crisosto, R Arias-Carrasco, P Sepulveda, L Garrido-Olivares, ... Biochimica et Biophysica Acta (BBA)-Molecular Basis of Disease 1867 (10), 166200, 2021 | 6 | 2021 |
RNAmining: A machine learning stand-alone and web server tool for RNA coding potential prediction TAR Ramos, NRO Galindo, R Arias-Carrasco, CF da Silva, ... F1000Research 10, 2021 | 6 | 2021 |
Characterization of microbial communities from gut microbiota of hypercholesterolemic and control subjects C Morales, G Rojas, C Rebolledo, M Rojas-Herrera, R Arias-Carrasco, ... Frontiers in Cellular and Infection Microbiology, 1723, 2022 | 5 | 2022 |
Differences in Bacterial Small RNAs in Stool Samples from Hypercholesterolemic and Normocholesterolemic Subjects C Morales, R Arias-Carrasco, V Maracaja-Coutinho, P Seron, F Lanas, ... International Journal of Molecular Sciences 24 (8), 7213, 2023 | 3 | 2023 |
Salmo salar Skin and Gill Microbiome during Piscirickettsia salmonis Infection M Godoy, Y Coca, R Suárez, M Montes de Oca, JW Bledsoe, I Burbulis, ... Animals 14 (1), 97, 2023 | 2 | 2023 |
Bacterial networks in Atlantic salmon with Piscirickettsiosis Y Coca, M Godoy, JP Pontigo, D Caro, V Maracaja-Coutinho, ... Scientific Reports 13 (1), 17321, 2023 | 2 | 2023 |
Predicting RNA families in nucleotide sequences using structrnafinder V Maracaja-Coutinho, R Arias-Carrasco, HI Nakaya, V Aliaga-Tobar Gene Prediction: Methods and Protocols, 15-27, 2019 | 2 | 2019 |