kmer-SVM: a web server for identifying predictive regulatory sequence features in genomic data sets C Fletez-Brant, D Lee, AS McCallion, MA Beer Nucleic acids research 41 (W1), W544-W556, 2013 | 142 | 2013 |
Genome-wide analysis of 53,400 people with irritable bowel syndrome highlights shared genetic pathways with mood and anxiety disorders C Eijsbouts, T Zheng, NA Kennedy, F Bonfiglio, CA Anderson, ... Nature genetics 53 (11), 1543-1552, 2021 | 141 | 2021 |
Genetic consequences of the transatlantic slave trade in the Americas SJ Micheletti, K Bryc, SGA Esselmann, WA Freyman, ME Moreno, ... The American Journal of Human Genetics 107 (2), 265-277, 2020 | 131 | 2020 |
The genetic architecture of depression in individuals of East Asian ancestry: a genome-wide association study O Giannakopoulou, K Lin, X Meng, MH Su, PH Kuo, RE Peterson, ... JAMA psychiatry 78 (11), 1258-1269, 2021 | 111 | 2021 |
The UGT2A1/UGT2A2 locus is associated with COVID-19-related loss of smell or taste JF Shelton, AJ Shastri, K Fletez-Brant, S Aslibekyan, A Auton Nature Genetics 54 (2), 121-124, 2022 | 85 | 2022 |
Common DNA sequence variation influences 3-dimensional conformation of the human genome DU Gorkin, Y Qiu, M Hu, K Fletez-Brant, T Liu, AD Schmitt, A Noor, ... Genome biology 20, 1-25, 2019 | 79 | 2019 |
Integration of ChIP-seq and machine learning reveals enhancers and a predictive regulatory sequence vocabulary in melanocytes DU Gorkin, D Lee, X Reed, C Fletez-Brant, SL Bessling, SK Loftus, ... Genome research 22 (11), 2290-2301, 2012 | 78 | 2012 |
flow c lean: Automated identification and removal of fluorescence anomalies in flow cytometry data K Fletez‐Brant, J Špidlen, RR Brinkman, M Roederer, PK Chattopadhyay Cytometry Part A 89 (5), 461-471, 2016 | 62 | 2016 |
Genome-wide study identifies association between HLA-B∗ 55: 01 and self-reported penicillin allergy K Krebs, J Bovijn, N Zheng, M Lepamets, JC Censin, T Jürgenson, D Särg, ... The American Journal of Human Genetics 107 (4), 612-621, 2020 | 48 | 2020 |
23andMe COVID-19 Team; Aslibekyan, S.; Auton, A. The UGT2A1/UGT2A2 locus is associated with COVID-19-related loss of smell or taste JF Shelton, AJ Shastri, K Fletez-Brant Nat Genet 54 (2), 121-4, 2022 | 41 | 2022 |
Quailty Control of flow cytometry data through compositional data analysis C Fletez-Brant, J Spidlen, R Brinkman, M Roederer, P Chattopadhyay preparation, 0 | 21 | |
Reconstitution of peripheral T cells by tissue-derived CCR4+ central memory cells following HIV-1 antiretroviral therapy YD Mahnke, K Fletez-Brant, I Sereti, M Roederer Pathogens & immunity 1 (2), 260, 2016 | 19 | 2016 |
Multi-trait genetic analysis identifies autoimmune loci associated with cutaneous melanoma UE Liyanage, S MacGregor, DT Bishop, J Shi, J An, JS Ong, X Han, ... Journal of Investigative Dermatology 142 (6), 1607-1616, 2022 | 15 | 2022 |
Prevalence of alpha-1 antitrypsin deficiency, self-reported behavior change, and health care engagement among direct-to-consumer recipients of a personalized genetic risk report JR Ashenhurst, H Nhan, JF Shelton, S Wu, JY Tung, SL Elson, JK Stoller, ... Chest 161 (2), 373-381, 2022 | 15 | 2022 |
Removing unwanted variation between samples in Hi-C experiments K Fletez-Brant, Y Qiu, DU Gorkin, M Hu, KD Hansen Briefings in Bioinformatics 25 (3), bbae217, 2024 | 14 | 2024 |
Building genomic analysis pipelines in a hackathon setting with bioinformatician teams: DNA-seq, epigenomics, metagenomics and RNA-seq B Busby, A Dillman, CL Simpson, I Fingerman, S Yun, DM Kristensen, ... BioRxiv, 018085, 2015 | 7 | 2015 |
MUSSEL: enhanced Bayesian polygenic risk prediction leveraging information across multiple ancestry groups J Jin, J Zhan, J Zhang, R Zhao, J O’Connell, Y Jiang, S Aslibekyan, ... Cell Genomics 4 (4), 2024 | 6 | 2024 |
A phenome-wide association and Mendelian randomisation study of alcohol use variants in a diverse cohort comprising over 3 million individuals MV Jennings, JJ Martínez-Magaña, NS Courchesne-Krak, RB Cupertino, ... Ebiomedicine 103, 2024 | | 2024 |
Assessing stationary distributions derived from chromatin contact maps MR Segal, K Fletez-Brant BMC bioinformatics 21, 1-15, 2020 | | 2020 |
Review of basic phylogenetic combinatorics by Andreas Dress, Katharina T. Huber, Jacobus Koolen, Vincent Moulton and Andreas Spillner. K Fletez-Brant SIGACT News 45 (3), 26-28, 2014 | | 2014 |