A Bayesian hierarchical model to detect differentially methylated loci from single nucleotide resolution sequencing data H Feng, KN Conneely, H Wu Nucleic acids research 42 (8), e69-e69, 2014 | 454 | 2014 |
Detection of differentially methylated regions from whole-genome bisulfite sequencing data without replicates H Wu, T Xu, H Feng, L Chen, B Li, B Yao, Z Qin, P Jin, KN Conneely Nucleic acids research 43 (21), e141-e141, 2015 | 317 | 2015 |
Molecular signatures associated with ZIKV exposure in human cortical neural progenitors F Zhang, C Hammack, SC Ogden, Y Cheng, EM Lee, Z Wen, X Qian, ... Nucleic acids research 44 (18), 8610-8620, 2016 | 182 | 2016 |
ADCYAP1R1 genotype associates with post‐traumatic stress symptoms in highly traumatized African‐American females LM Almli, KB Mercer, K Kerley, H Feng, B Bradley, KN Conneely, ... American Journal of Medical Genetics Part B: Neuropsychiatric Genetics 162 …, 2013 | 112 | 2013 |
A human forebrain organoid model of fragile X syndrome exhibits altered neurogenesis and highlights new treatment strategies Y Kang, Y Zhou, Y Li, Y Han, J Xu, W Niu, Z Li, S Liu, H Feng, W Huang, ... Nature Neuroscience 24 (10), 1377-1391, 2021 | 98 | 2021 |
Induced organoids derived from patients with ulcerative colitis recapitulate colitic reactivity SK Sarvestani, S Signs, B Hu, Y Yeu, H Feng, Y Ni, DR Hill, RC Fisher, ... Nature communications 12 (1), 262, 2021 | 65 | 2021 |
InfiniumPurify: An R package for estimating and accounting for tumor purity in cancer methylation research Y Qin, H Feng, M Chen, H Wu, X Zheng Genes & Diseases 5 (1), 43-45, 2018 | 62 | 2018 |
Supplementary Online Content LM Almli, R Duncan, H Feng | 58* | 2014 |
Correcting systematic inflation in genetic association tests that consider interaction effects: Application to a genome-wide association study of posttraumatic stress disorder LM Almli, R Duncan, H Feng, D Ghosh, EB Binder, B Bradley, KJ Ressler, ... JAMA psychiatry 71 (12), 1392-1399, 2014 | 50 | 2014 |
Disease prediction by cell-free DNA methylation H Feng, P Jin, H Wu Briefings in bioinformatics 20 (2), 585-597, 2019 | 45 | 2019 |
Accounting for tumor purity improves cancer subtype classification from DNA methylation data W Zhang, H Feng, H Wu, X Zheng Bioinformatics 33 (17), 2651-2657, 2017 | 42 | 2017 |
Galactic cosmic radiation induces persistent epigenome alterations relevant to human lung cancer EM Kennedy, DR Powell, Z Li, JSK Bell, BG Barwick, H Feng, ... Scientific reports 8 (1), 6709, 2018 | 40 | 2018 |
Differential methylation analysis for bisulfite sequencing using DSS H Feng, H Wu Quantitative Biology 7 (4), 327-334, 2019 | 34 | 2019 |
Follow-up and extension of a prior genome-wide association study of posttraumatic stress disorder: gene× environment associations and structural magnetic resonance imaging in a … LM Almli, A Srivastava, N Fani, K Kerley, KB Mercer, H Feng, B Bradley, ... Biological psychiatry 76 (4), e3-e4, 2014 | 19 | 2014 |
A neural network-based method for exhaustive cell label assignment using single cell RNA-seq data Z Li, H Feng Scientific reports 12 (1), 910, 2022 | 11 | 2022 |
Problematic alcohol use associates with sodium channel and clathrin linker 1 (SCLT1) in trauma‐exposed populations LM Almli, A Lori, JL Meyers, J Shin, N Fani, AX Maihofer, CM Nievergelt, ... Addiction biology 23 (5), 1145-1159, 2018 | 10 | 2018 |
Damaged mitochondria coincide with presynaptic vesicle loss and abnormalities in alzheimer’s disease brain W Wang, F Zhao, Y Lu, SL Siedlak, H Fujioka, H Feng, G Perry, X Zhu Acta Neuropathologica Communications 11 (1), 54, 2023 | 7 | 2023 |
A comprehensive assessment of cell type-specific differential expression methods in bulk data G Meng, W Tang, E Huang, Z Li, H Feng Briefings in Bioinformatics 24 (1), bbac516, 2023 | 7 | 2023 |
Peripheral sTREM2-Related Inflammatory Activity Alterations in Early-Stage Alzheimer’s Disease GE Weber, M Khrestian, ED Tuason, Y Shao, J Pillai, S Rao, H Feng, ... The Journal of Immunology 208 (10), 2283-2299, 2022 | 7 | 2022 |
Evaluation of epitranscriptome-wide N6-methyladenosine differential analysis methods D Duan, W Tang, R Wang, Z Guo, H Feng Briefings in Bioinformatics 24 (3), bbad139, 2023 | 4 | 2023 |