Chromatin Potential Identified by Shared Single-Cell Profiling of RNA and Chromatin S Ma, B Zhang, L LaFave, C Zachary, H Yan, D Jiarui, A Brack, V Kartha, ... Cell 2020 (183), 1103-1116, 2020 | 673 | 2020 |
Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram T Biancalani, G Scalia, L Buffoni, R Avasthi, Z Lu, A Sanger, N Tokcan, ... Nature methods 18 (11), 1352-1362, 2021 | 361 | 2021 |
Hyperactivation of sympathetic nerves drives depletion of melanocyte stem cells B Zhang, S Ma, I Rachmin, M He, P Baral, S Choi, WA Gonçalves, ... Nature 577 (7792), 676-681, 2020 | 237 | 2020 |
Transcriptional Atlas of Intestinal Immune Cells Reveals that Neuropeptide α-CGRP Modulates Group 2 Innate Lymphoid Cell Responses AR Heping Xu, Jiarui Ding, Coraline Porter, AntoniaWallrapp, MarcinTabaka ... Immunity 51 (4), 696-708, 2019 | 178 | 2019 |
Epigenomic State Transitions Characterize Tumor Progression in Mouse Lung Adenocarcinoma. LM LaFave, VK Kartha, S Ma, K Meli, ID Priore, C Lareau, S Naranjo, ... Cancer Cell 2020, 2020 | 175 | 2020 |
Recent advances in the use of microfluidic technologies for single cell analysis TW Murphy, Q Zhang, LB Naler, S Ma, C Lu Analyst 143 (1), 60-80, 2018 | 169 | 2018 |
Spatial profiling of chromatin accessibility in mouse and human tissues Y Deng, M Bartosovic, S Ma, D Zhang, P Kukanja, Y Xiao, G Su, Y Liu, ... Nature 609 (7926), 375-383, 2022 | 153 | 2022 |
Spatial epigenome–transcriptome co-profiling of mammalian tissues D Zhang, Y Deng, P Kukanja, E Agirre, M Bartosovic, M Dong, C Ma, S Ma, ... Nature 616 (7955), 113-122, 2023 | 105 | 2023 |
Corticosterone inhibits GAS6 to govern hair follicle stem-cell quiescence S Choi, B Zhang, S Ma, M Gonzalez-Celeiro, D Stein, X Jin, ST Kim, ... Nature 592 (7854), 428-432, 2021 | 95 | 2021 |
Functional inference of gene regulation using single-cell multi-omics VK Kartha, FM Duarte, Y Hu, S Ma, JG Chew, CA Lareau, A Earl, ... Cell genomics 2 (9), 2022 | 92 | 2022 |
Visible paper chip immunoassay for rapid determination of bacteria in water distribution system S Ma, Y Tang, J Liu, J Wu Talanta 120, 135-140, 2014 | 74 | 2014 |
A transcription factor atlas of directed differentiation J Joung, S Ma, T Tay, KR Geiger-Schuller, PC Kirchgatterer, VK Verdine, ... Cell 186 (1), 209-229. e26, 2023 | 64 | 2023 |
Smarca4 Inactivation Promotes Lineage-Specific Transformation and Early Metastatic Features in the Lung CP Concepcion, S Ma, LM LaFave, A Bhutkar, M Liu, LP DeAngelo, ... Cancer discovery 12 (2), 562-585, 2022 | 60 | 2022 |
Inference and effects of barcode multiplets in droplet-based single-cell assays C Lareau, S Ma, F Duarte, J Buenrostro Nature Communication 11 (2020), 2020 | 52 | 2020 |
Epigenetic memory of coronavirus infection in innate immune cells and their progenitors JG Cheong, A Ravishankar, S Sharma, CN Parkhurst, SA Grassmann, ... Cell 186 (18), 3882-3902. e24, 2023 | 51 | 2023 |
Low-input and multiplexed microfluidic assay reveals epigenomic variation across cerebellum and prefrontal cortex S Ma, YP Hsieh, J Ma, C Lu Science Advances 4 (4), 2018 | 43 | 2018 |
Microfluidics for Genome-wide Studies Involving Next Generation Sequencing S Ma, T Murphy, C Lu Biomicrofluidics 11 (2017), 021501, 2017 | 43 | 2017 |
Cell-type-specific brain methylomes profiled via ultralow-input microfluidics S Ma, MF Revenga, Z Sun, C Sun, TW Murphy, H Xie, J González-Maeso, ... Nature Biomedical Engineering 2018 (2), 183–194, 2018 | 39 | 2018 |
Immunomagnetic separation of tumor initiating cells by screening two surface markers C Sun, YP Hsieh, S Ma, S Geng, Z Cao, L Li, C Lu Scientific Reports 7, 40632, 2017 | 35 | 2017 |
Diffusion-based microfluidic PCR for “one-pot” analysis of cells S Ma, DN Loufakis, Z Cao, Y Chang, LEK Achenie, C Lu Lab on a Chip 14 (16), 2905-2909, 2014 | 31 | 2014 |