Transfer learning in biomedical natural language processing: an evaluation of BERT and ELMo on ten benchmarking datasets Y Peng, S Yan, Z Lu arXiv preprint arXiv:1906.05474, 2019 | 928 | 2019 |
Verbal aggression detection on Twitter comments: convolutional neural network for short-text sentiment analysis J Chen, S Yan, KC Wong Neural Computing and Applications 32, 10809-10818, 2020 | 100 | 2020 |
Artificial intelligence in action: addressing the COVID-19 pandemic with natural language processing Q Chen, R Leaman, A Allot, L Luo, CH Wei, S Yan, Z Lu Annual review of biomedical data science 4 (1), 313-339, 2021 | 69 | 2021 |
BioConceptVec: Creating and evaluating literature-based biomedical concept embeddings on a large scale Q Chen, K Lee, S Yan, S Kim, CH Wei, Z Lu PLoS computational biology 16 (4), e1007617, 2020 | 50 | 2020 |
PhenoTagger: a hybrid method for phenotype concept recognition using human phenotype ontology L Luo, S Yan, PT Lai, D Veltri, A Oler, S Xirasagar, R Ghosh, M Similuk, ... Bioinformatics 37 (13), 1884-1890, 2021 | 35 | 2021 |
Transfer learning in biomedical natural language processing: An evaluation of BERT and ELMo on ten benchmarking datasets. arXiv 2019 Y Peng, S Yan, Z Lu arXiv preprint arXiv:1906.05474, 1906 | 27 | 1906 |
Context awareness and embedding for biomedical event extraction S Yan, KC Wong Bioinformatics 36 (2), 637-643, 2020 | 19 | 2020 |
DNA sequencing technologies: sequencing data protocols and bioinformatics tools KC Wong, J Zhang, S Yan, X Li, Q Lin, S Kwong, C Liang ACM Computing Surveys (CSUR) 52 (5), 1-30, 2019 | 19 | 2019 |
Early cancer detection from multianalyte blood test results KC Wong, J Chen, J Zhang, J Lin, S Yan, S Zhang, X Li, C Liang, C Peng, ... Iscience 15, 332-341, 2019 | 18 | 2019 |
Proceedings of the 18th BioNLP Workshop and Shared Task Y Peng, S Yan, L Zhiyong Association for Computational Linguistics, Florence, Italy, 2019 | 17 | 2019 |
Feature selection and feature extraction: highlights HM Wong, X Chen, HH Tam, J Lin, S Zhang, S Yan, X Li, KC Wong Proceedings of the 2021 5th International Conference on Intelligent Systems …, 2021 | 10 | 2021 |
Aggressivity detection on social network comments J Chen, S Yan, KC Wong Proceedings of the 2017 International Conference on Intelligent Systems …, 2017 | 9 | 2017 |
Future DNA computing device and accompanied tool stack: Towards high-throughput computation S Yan, KC Wong Future Generation Computer Systems 117, 111-124, 2021 | 8 | 2021 |
Elucidating high-dimensional cancer hallmark annotation via enriched ontology S Yan, KC Wong Journal of Biomedical Informatics 73, 84-94, 2017 | 7 | 2017 |
GESgnExt: gene expression signature extraction and meta-analysis on gene expression omnibus S Yan, KC Wong IEEE Journal of Biomedical and Health Informatics 24 (1), 311-318, 2019 | 5 | 2019 |
Deleterious non-synonymous single nucleotide polymorphism predictions on human transcription factors KC Wong, S Yan, Q Lin, X Li, C Peng IEEE/ACM transactions on computational biology and bioinformatics 17 (1 …, 2018 | 5 | 2018 |
PhenoRerank: A re-ranking model for phenotypic concept recognition pre-trained on human phenotype ontology S Yan, L Luo, PT Lai, D Veltri, AJ Oler, S Xirasagar, R Ghosh, M Similuk, ... Journal of biomedical informatics 129, 104059, 2022 | 4 | 2022 |
MotifHub: Detection of trans-acting DNA motif group with probabilistic modeling algorithm Z Liu, HM Wong, X Chen, J Lin, S Zhang, S Yan, F Wang, X Li, KC Wong Computers in Biology and Medicine 168, 107753, 2024 | 1 | 2024 |
Supplementary Material for: DNA Sequencing Technologies: Sequencing Data Protocols and Bioinformatics Tools KAC WONG, J ZHANG, S YAN, X LI, Q LIN, SAM KWONG, C LIANG | | 2019 |
Probabilistic Inference on Multiple Normalized Genome-Wide Signal Profiles With Model Regularization KC Wong, C Peng, S Yan, C Liang IEEE Transactions on NanoBioscience 16 (1), 43-50, 2016 | | 2016 |