| NeuroPred-PLM: an interpretable and robust model for neuropeptide prediction by protein language model L Wang, C Huang, M Wang, Z Xue, Y Wang Briefings in Bioinformatics 24 (2), bbad077, 2023 | 18 | 2023 |
| Improving the topology prediction of α-helical transmembrane proteins with deep transfer learning L Wang, H Zhong, Z Xue, Y Wang Computational and Structural Biotechnology Journal 20, 1993-2000, 2022 | 13 | 2022 |
| Deciphering the protein landscape with ProtFlash, a lightweight language model L Wang, H Zhang, W Xu, Z Xue, Y Wang Cell Reports Physical Science 4 (10), 2023 | 5 | 2023 |
| Res-Dom: predicting protein domain boundary from sequence using deep residual network and Bi-LSTM L Wang, H Zhong, Z Xue, Y Wang Bioinformatics Advances 2 (1), vbac060, 2022 | 4 | 2022 |
| NeuroPep 2.0: An Updated Database Dedicated to Neuropeptide and Its Receptor Annotations M Wang, L Wang, W Xu, Z Chu, H Wang, J Lu, Z Xue, Y Wang Journal of Molecular Biology 436 (4), 168416, 2024 | 2 | 2024 |
| DeepNeuropePred: a robust and universal tool to predict cleavage sites from neuropeptide precursors by protein language model L Wang, Z Zeng, Z Xue, Y Wang Computational and Structural Biotechnology Journal 23, 309-315, 2023 | 2 | 2023 |
| GNN-Dom: an unsupervised method for protein domain partition via protein contact map L Wang, Y Wang International Symposium on Bioinformatics Research and Applications, 286-294, 2022 | 2 | 2022 |
| Beyond ESM2: Graph-Enhanced Protein Sequence Modeling with Efficient Clustering S Jiao, B Li, L Wang, X Zhang, W Chen, J Peng, Z Wei arXiv preprint arXiv:2404.15805, 2024 | | 2024 |
