ER-stress-induced transcriptional regulation increases protein synthesis leading to cell death J Han, SH Back, J Hur, YH Lin, R Gildersleeve, J Shan, CL Yuan, ... Nature cell biology 15 (5), 481-490, 2013 | 1659 | 2013 |
MicroRNA-320 is involved in the regulation of cardiac ischemia/reperfusion injury by targeting heat-shock protein 20 XP Ren, J Wu, X Wang, MA Sartor, J Qian, K Jones, P Nicolaou, ... Circulation 119 (17), 2357-2366, 2009 | 644 | 2009 |
Metscape 2 bioinformatics tool for the analysis and visualization of metabolomics and gene expression data A Karnovsky, T Weymouth, T Hull, VG Tarcea, G Scardoni, C Laudanna, ... Bioinformatics 28 (3), 373-380, 2012 | 436 | 2012 |
Characterization of HPV and host genome interactions in primary head and neck cancers M Parfenov, CS Pedamallu, N Gehlenborg, SS Freeman, L Danilova, ... Proceedings of the National Academy of Sciences 111 (43), 15544-15549, 2014 | 425 | 2014 |
Machine learning approaches and databases for prediction of drug–target interaction: a survey paper M Bagherian, E Sabeti, K Wang, MA Sartor, Z Nikolovska-Coleska, ... Briefings in bioinformatics 22 (1), 247-269, 2021 | 310 | 2021 |
Intensity-based hierarchical Bayes method improves testing for differentially expressed genes in microarray experiments MA Sartor, CR Tomlinson, SC Wesselkamper, S Sivaganesan, ... BMC bioinformatics 7, 1-17, 2006 | 297 | 2006 |
Genome-wide DNA methylation differences between late-onset Alzheimer's disease and cognitively normal controls in human frontal cortex KM Bakulski, DC Dolinoy, MA Sartor, HL Paulson, JR Konen, ... Journal of Alzheimer's Disease 29 (3), 571-588, 2012 | 285 | 2012 |
Annotatr: genomic regions in context RG Cavalcante, MA Sartor Bioinformatics 33 (15), 2381-2383, 2017 | 241 | 2017 |
MethylSig: a whole genome DNA methylation analysis pipeline Y Park, ME Figueroa, LS Rozek, MA Sartor Bioinformatics 30 (17), 2414-2422, 2014 | 230 | 2014 |
IDH1-R132H acts as a tumor suppressor in glioma via epigenetic up-regulation of the DNA damage response FJ Núñez, FM Mendez, P Kadiyala, MS Alghamri, MG Savelieff, ... Science translational medicine 11 (479), eaaq1427, 2019 | 229 | 2019 |
LRpath: a logistic regression approach for identifying enriched biological groups in gene expression data MA Sartor, GD Leikauf, M Medvedovic Bioinformatics 25 (2), 211-217, 2009 | 212 | 2009 |
Progression of BRAF-induced thyroid cancer is associated with epithelial–mesenchymal transition requiring concomitant MAP kinase and TGFβ signaling JA Knauf, MA Sartor, M Medvedovic, E Lundsmith, M Ryder, M Salzano, ... Oncogene 30 (28), 3153-3162, 2011 | 202 | 2011 |
Genome-wide methylation and expression differences in HPV (+) and HPV (-) squamous cell carcinoma cell lines are consistent with divergent mechanisms of carcinogenesis MA Sartor, DC Dolinoy, TR Jones, JA Colacino, MEP Prince, TE Carey, ... Epigenetics 6 (6), 777-787, 2011 | 195 | 2011 |
HPV integration in HNSCC correlates with survival outcomes, immune response signatures, and candidate drivers LA Koneva, Y Zhang, S Virani, PB Hall, JB McHugh, DB Chepeha, ... Molecular Cancer Research 16 (1), 90-102, 2018 | 189 | 2018 |
Melanocortin 1 receptor genotype: an important determinant of the damage response of melanocytes to ultraviolet radiation AL Kadekaro, S Leachman, RJ Kavanagh, V Swope, P Cassidy, D Supp, ... The FASEB Journal 24 (10), 3850, 2010 | 169 | 2010 |
ConceptGen: a gene set enrichment and gene set relation mapping tool MA Sartor, V Mahavisno, VG Keshamouni, J Cavalcoli, Z Wright, ... Bioinformatics 26 (4), 456-463, 2010 | 169 | 2010 |
Conditional activation of RET/PTC3 and BRAFV600E in thyroid cells is associated with gene expression profiles that predict a preferential role of BRAF in extracellular matrix … C Mesa Jr, M Mirza, N Mitsutake, M Sartor, M Medvedovic, C Tomlinson, ... Cancer research 66 (13), 6521-6529, 2006 | 160 | 2006 |
The IRE1α/XBP1s pathway is essential for the glucose response and protection of β cells JR Hassler, DL Scheuner, S Wang, J Han, VK Kodali, P Li, J Nguyen, ... PLoS biology 13 (10), e1002277, 2015 | 157 | 2015 |
ChIP-Enrich: gene set enrichment testing for ChIP-seq data RP Welch, C Lee, PM Imbriano, S Patil, TE Weymouth, RA Smith, LJ Scott, ... Nucleic acids research 42 (13), e105-e105, 2014 | 149 | 2014 |
Epigenetics: relevance and implications for public health LS Rozek, DC Dolinoy, MA Sartor, GS Omenn Annual review of public health 35 (1), 105-122, 2014 | 146 | 2014 |