| The human tumor atlas network: charting tumor transitions across space and time at single-cell resolution O Rozenblatt-Rosen, A Regev, P Oberdoerffer, T Nawy, A Hupalowska, ... Cell 181 (2), 236-249, 2020 | 406 | 2020 |
| Differential pre-malignant programs and microenvironment chart distinct paths to malignancy in human colorectal polyps B Chen, S Cherie’R, ET McKinley, AJ Simmons, MA Ramirez-Solano, ... Cell 184 (26), 6262-6280. e26, 2021 | 175 | 2021 |
| Succinate produced by intestinal microbes promotes specification of tuft cells to suppress ileal inflammation A Banerjee, CA Herring, B Chen, H Kim, AJ Simmons, AN Southard-Smith, ... Gastroenterology 159 (6), 2101-2115. e5, 2020 | 161 | 2020 |
| Single-cell transcriptomics reveals a conserved metaplasia program in pancreatic injury Z Ma, NK Lytle, B Chen, N Jyotsana, SW Novak, CJ Cho, L Caplan, ... Gastroenterology 162 (2), 604-620. e20, 2022 | 59 | 2022 |
| ATAC-Me captures prolonged DNA methylation of dynamic chromatin accessibility loci during cell fate transitions KR Barnett, BE Decato, TJ Scott, TJ Hansen, B Chen, J Attalla, AD Smith, ... Molecular cell 77 (6), 1350-1364. e6, 2020 | 59 | 2020 |
| Quantitative assessment of cell population diversity in single-cell landscapes Q Liu, CA Herring, Q Sheng, J Ping, AJ Simmons, B Chen, A Banerjee, ... PLoS biology 16 (10), e2006687, 2018 | 42 | 2018 |
| Single-cell computational strategies for lineage reconstruction in tissue systems CA Herring, B Chen, ET McKinley, KS Lau Cellular and molecular gastroenterology and hepatology 5 (4), 539-548, 2018 | 41 | 2018 |
| Automated quality control and cell identification of droplet-based single-cell data using dropkick CN Heiser, VM Wang, B Chen, JJ Hughey, KS Lau Genome Research, gr. 271908.120, 2021 | 32 | 2021 |
| Matrix stiffness enhances cancer-macrophage interactions and M2-like macrophage accumulation in the breast tumor microenvironment PV Taufalele, W Wang, AJ Simmons, AN Southard-Smith, B Chen, ... Acta biomaterialia 163, 365-377, 2023 | 28 | 2023 |
| Dual indexed library design enables compatibility of in-Drop single-cell RNA-sequencing with exAMP chemistry sequencing platforms AN Southard-Smith, AJ Simmons, B Chen, AL Jones, MA Ramirez Solano, ... BMC genomics 21, 1-15, 2020 | 27 | 2020 |
| Mining tasks and task characteristics from electronic health record audit logs with unsupervised machine learning B Chen, W Alrifai, C Gao, B Jones, L Novak, N Lorenzi, D France, B Malin, ... Journal of the American Medical Informatics Association 28 (6), 1168-1177, 2021 | 25 | 2021 |
| Use of single-cell-omic technologies to study the gastrointestinal tract and diseases, from single cell identities to patient features M Islam, B Chen, JM Spraggins, RT Kelly, KS Lau Gastroenterology 159 (2), 453-466. e1, 2020 | 22 | 2020 |
| Molecular cartography uncovers evolutionary and microenvironmental dynamics in sporadic colorectal tumors CN Heiser, AJ Simmons, F Revetta, ET McKinley, MA Ramirez-Solano, ... Cell 186 (25), 5620-5637. e16, 2023 | 13 | 2023 |
| MTG16 regulates colonic epithelial differentiation, colitis, and tumorigenesis by repressing E protein transcription factors RE Brown, J Jacobse, SA Anant, KM Blunt, B Chen, PN Vega, CT Jones, ... JCI Insight 7 (10), e153045, 2022 | 13 | 2022 |
| Coregulator Sin3a promotes postnatal murine β-cell fitness by regulating genes in Ca2+ homeostasis, cell survival, vesicle biosynthesis, glucose metabolism, and stress response X Yang, SM Graff, CN Heiser, KH Ho, B Chen, AJ Simmons, ... Diabetes 69 (6), 1219-1231, 2020 | 13 | 2020 |
| Deciphering the cancer microenvironment from bulk data with EcoTyper A Rolong, B Chen, KS Lau Cell 184 (21), 5306-5308, 2021 | 11 | 2021 |
| Processing single-cell RNA-seq data for dimension reduction-based analyses using open-source tools B Chen, MA Ramirez-Solano, CN Heiser, Q Liu, KS Lau STAR protocols 2 (2), 100450, 2021 | 10 | 2021 |
| pyNVR: investigating factors affecting feature selection from scRNA-seq data for lineage reconstruction B Chen, CA Herring, KS Lau Bioinformatics 35 (13), 2335-2337, 2019 | 10 | 2019 |
| A contamination focused approach for optimizing the single-cell RNA-seq experiment D Arceneaux, Z Chen, AJ Simmons, CN Heiser, AN Southard-Smith, ... Iscience 26 (7), 2023 | 5 | 2023 |
| Measuring collaboration through concurrent electronic health record usage: network analysis study P Li, B Chen, E Rhodes, J Slagle, MW Alrifai, D France, Y Chen JMIR medical informatics 9 (9), e28998, 2021 | 5 | 2021 |
Ken LauProfessor, Vanderbilt University School of Medicine在 vanderbilt.edu 的电子邮件经过验证
