MicroRNA-128 inhibits glioma cells proliferation by targeting transcription factor E2F3a Y Zhang, T Chao, R Li, W Liu, Y Chen, X Yan, Y Gong, B Yin, W Liu, ... Journal of molecular medicine 87, 43-51, 2009 | 328 | 2009 |
MicroRNA-21 down-regulates the expression of tumor suppressor PDCD4 in human glioblastoma cell T98G Y Chen, W Liu, T Chao, Y Zhang, X Yan, Y Gong, B Qiang, J Yuan, M Sun, ... Cancer letters 272 (2), 197-205, 2008 | 296 | 2008 |
Pervasive Chromatin-RNA Binding Protein Interactions Enable RNA-Based Regulation of Transcription XDF Rui Xiao*, Jia-Yu Chen*, Zhengyu Liang*, Daji Luo, Geng Chen, Zhi John ... Cell 178 (1), 107-121. e18, 2019 | 263 | 2019 |
Co-inhibitory Molecule B7 Superfamily Member 1 Expressed by Tumor-Infiltrating Myeloid Cells Induces Dysfunction of Anti-tumor CD8+ T Cells DC Li J1, Lee Y2, Li Y3, Jiang Y1, Lu H1, Zang W1, Zhao X1, Liu L4, Chen Y3 ... Immunity 8 (4), 773-786, 2018 | 181* | 2018 |
PhaSepDB: a database of liquid–liquid phase separation related proteins. TL Kaiqiang You#, Qi Huang#, Chunyu Yu#, Boyan Shen, Cristoffer Sevilla ... Nucleic Acids Research, 2020 | 167 | 2020 |
Integrating next-generation sequencing and traditional tongue diagnosis to determine tongue coating microbiome B Jiang, X Liang, Y Chen, T Ma, L Liu, J Li, R Jiang, T Chen, X Zhang, S Li Scientific reports 2 (1), 936, 2012 | 149 | 2012 |
ChIA-PET2: a versatile and flexible pipeline for ChIA-PET data analysis G Li, Y Chen, MP Snyder, MQ Zhang Nucleic acids research 45 (1), e4-e4, 2017 | 109 | 2017 |
SEAM is a spatial single nuclear metabolomics method for dissecting tissue microenvironment Z Yuan, Q Zhou, L Cai, L Pan, W Sun, S Qumu, S Yu, J Feng, H Zhao, ... Nature Methods 18 (10), 1223-1232, 2021 | 94 | 2021 |
Identification of responsive gene modules by network-based gene clustering and extending: application to inflammation and angiogenesis J Gu, Y Chen, S Li, Y Li BMC systems biology 4, 1-18, 2010 | 79 | 2010 |
BL-Hi-C is an efficient and sensitive approach for capturing structural and regulatory chromatin interactions Z Liang, G Li, Z Wang, MN Djekidel, Y Li, MP Qian, MQ Zhang, Y Chen Nature communications 8 (1), 1622, 2017 | 77 | 2017 |
MCMs in Cancer: Prognostic Potential and Mechanisms YC Si Yu , Guanqun Wang, Yue Shi , Haifeng Xu, Yongchang Zheng Analytical Cellular Pathology, 2020 | 73 | 2020 |
FIND: difFerential chromatin INteractions Detection using a spatial Poisson process MN Djekidel, Y Chen, MQ Zhang Genome research 28 (3), 412-422, 2018 | 72 | 2018 |
MyoD is a 3D genome structure organizer for muscle cell identity R Wang, F Chen, Q Chen, X Wan, M Shi, AK Chen, Z Ma, G Li, M Wang, ... Nature communications 13 (1), 205, 2022 | 65 | 2022 |
Network embedding-based representation learning for single cell RNA-seq data X Li, W Chen, Y Chen, X Zhang, J Gu, MQ Zhang Nucleic acids research 45 (19), e166-e166, 2017 | 59 | 2017 |
MiR-21 mediates the radiation resistance of glioblastoma cells by regulating PDCD4 and hMSH2 ZJX Chao TF, Xiong HH, Liu W, Chen Y J Huazhong Univ Sci Technolog Med Sci., 2013 | 54* | 2013 |
Engineering EMT using 3D micro-scaffold to promote hepatic functions for drug hepatotoxicity evaluation J Wang, F Chen, L Liu, C Qi, B Wang, X Yan, C Huang, W Hou, MQ Zhang, ... Biomaterials 91, 11-22, 2016 | 53 | 2016 |
Platelets direct monocyte differentiation into epithelioid-like multinucleated giant foam cells with suppressive capacity upon mycobacterial stimulation Y Feng, A Dorhoi, HJ Mollenkopf, H Yin, Z Dong, L Mao, J Zhou, A Bi, ... The Journal of infectious diseases 210 (11), 1700-1710, 2014 | 52 | 2014 |
Hsa-miR-1246, hsa-miR-320a and hsa-miR-196b-5p inhibitors can reduce the cytotoxicity of Ebola virus glycoprotein in vitro MM Sheng, Y Zhong, Y Chen, JC Du, XW Ju, C Zhao, GG Zhang, ... Science China Life Sciences 57, 959-972, 2014 | 45 | 2014 |
HiCDB: a sensitive and robust method for detecting contact domain boundaries F Chen, G Li, MQ Zhang, Y Chen Nucleic acids research 46 (21), 11239-11250, 2018 | 44 | 2018 |
Sox2 and Klf4 as the functional core in pluripotency induction without exogenous Oct4 Z An, P Liu, J Zheng, C Si, T Li, Y Chen, T Ma, MQ Zhang, Q Zhou, S Ding Cell reports 29 (7), 1986-2000. e8, 2019 | 38 | 2019 |