| The landscape of cell–cell communication through single-cell transcriptomics AA Almet, Z Cang, S Jin, Q Nie Current opinion in systems biology 26, 12-23, 2021 | 131 | 2021 |
| Paneth cell-rich regions separated by a cluster of Lgr5+ cells initiate crypt fission in the intestinal stem cell niche AJ Langlands, AA Almet, PL Appleton, IP Newton, JM Osborne, IS Näthke PLoS biology 14 (6), e1002491, 2016 | 104 | 2016 |
| Screening cell–cell communication in spatial transcriptomics via collective optimal transport Z Cang, Y Zhao, AA Almet, A Stabell, R Ramos, MV Plikus, SX Atwood, ... Nature methods 20 (2), 218-228, 2023 | 97 | 2023 |
| Modeling perspectives on the intestinal crypt, a canonical system for growth, mechanics, and remodeling AA Almet, PK Maini, DE Moulton, HM Byrne Current Opinion in Biomedical Engineering 15, 32-39, 2020 | 26 | 2020 |
| A multicellular model of intestinal crypt buckling and fission AA Almet, BD Hughes, KA Landman, IS Näthke, JM Osborne Bulletin of Mathematical Biology 80, 335-359, 2018 | 16 | 2018 |
| The promising application of cell-cell interaction analysis in cancer from single-cell and spatial transcriptomics X Wang, AA Almet, Q Nie Seminars in cancer biology, 2023 | 15 | 2023 |
| Post-buckling behaviour of a growing elastic rod AA Almet, HM Byrne, PK Maini, DE Moulton arXiv preprint arXiv:1803.07428, 2018 | 14 | 2018 |
| When push comes to shove: Exclusion processes with nonlocal consequences AA Almet, M Pan, BD Hughes, KA Landman Physica A: Statistical Mechanics and its Applications 437, 119-129, 2015 | 10 | 2015 |
| Chronic TNFα-driven injury delays cell migration to villi in the intestinal epithelium D Muraro, A Parker, L Vaux, S Filippi, AA Almet, AG Fletcher, AJM Watson, ... Journal of The Royal Society Interface 15 (145), 20180037, 2018 | 8 | 2018 |
| The role of mechanics in the growth and homeostasis of the intestinal crypt AA Almet, HM Byrne, PK Maini, DE Moulton Biomechanics and Modeling in Mechanobiology 20, 585-608, 2021 | 6 | 2021 |
| A roadmap for a consensus human skin cell atlas and single-cell data standardization AA Almet, H Yuan, K Annusver, R Ramos, Y Liu, J Wiedemann, DH Sorkin, ... Journal of Investigative Dermatology 143 (9), 1667-1677, 2023 | 5 | 2023 |
| Analyzing network diversity of cell–cell interactions in COVID-19 using single-cell transcriptomics X Wang, AA Almet, Q Nie Frontiers in Genetics 13, 948508, 2022 | 4 | 2022 |
| Modelling the effect of subcellular mutations on the migration of cells in the colorectal crypt LB Romijn, AA Almet, CW Tan, JM Osborne BMC bioinformatics 21, 1-16, 2020 | 4 | 2020 |
| Biomechanics of intestinal crypt morphogenesis A Almet University of Oxford, 2019 | 1 | 2019 |
| Emx2 underlies the development and evolution of marsupial gliding membranes JA Moreno, O Dudchenko, CY Feigin, SA Mereby, Z Chen, R Ramos, ... Nature, 1-9, 2024 | | 2024 |
| A multiscale computational framework for the development of spines in molluscan shells DE Moulton, N Aubert-Kato, AA Almet, A Sato PLOS Computational Biology 20 (3), e1011835, 2024 | | 2024 |
| LB1674 A roadmap for the human skin cell atlas A Almet, H Yuan, K Annusver, R Ramos, Y Liu, J Wiedemann, D Sorkin, ... Journal of Investigative Dermatology 143 (9), B10, 2023 | | 2023 |
| LB1021 Single-cell dynamics of fibroblast states during skin wound healing in mice AA Almet, Q Nie, M Plikus Journal of Investigative Dermatology 142 (8), B34, 2022 | | 2022 |
| Multiscale Modelling of Intestinal Crypt Fission AA Almet University of Melbourne, 2015 | | 2015 |
