| A multimodal cell census and atlas of the mammalian primary motor cortex Principal manuscript editors, Analysis coordination, ... Nature 598 (7879), 86-102, 2021 | 327 | 2021 |
| A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex Z Yao, H Liu, F Xie, S Fischer, RS Adkins, AI Aldridge, SA Ament, ... Nature 598 (7879), 103-110, 2021 | 235 | 2021 |
| gEAR: gene Expression Analysis Resource portal for community-driven, multi-omic data exploration J Orvis, B Gottfried, J Kancherla, RS Adkins, Y Song, AA Dror, D Olley, ... Nature methods 18 (8), 843-844, 2021 | 131 | 2021 |
| An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types Z Yao, H Liu, F Xie, S Fischer, AS Booeshaghi, RS Adkins, AI Aldridge, ... Biorxiv, 2020.02. 29.970558, 2020 | 63 | 2020 |
| Aligner optimization increases accuracy and decreases compute times in multi-species sequence data KM Robinson, AS Hawkins, I Santana-Cruz, RS Adkins, AC Shetty, ... Microbial genomics 3 (9), e000122, 2017 | 22 | 2017 |
| The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain SA Ament, RS Adkins, R Carter, E Chrysostomou, C Colantuoni, ... Nucleic Acids Research 51 (D1), D1075-D1085, 2023 | 19 | 2023 |
| CloVR-Comparative: automated, cloud-enabled comparative microbial genome sequence analysis pipeline S Agrawal, C Arze, RS Adkins, J Crabtree, D Riley, M Vangala, K Galens, ... BMC genomics 18, 1-11, 2017 | 15 | 2017 |
| FADU: a quantification tool for prokaryotic transcriptomic analyses M Chung, RS Adkins, JSA Mattick, KR Bradwell, AC Shetty, L Sadzewicz, ... Msystems 6 (1), 10.1128/msystems. 00917-20, 2021 | 14* | 2021 |
| CAVERN: Computational and visualization environment for RNA-seq analyses AC Shetty, RS Adkins, A Chatterjee, CL McCracken, T Hodges, ... Proceedings of the 69th Annual Meeting American Society of Human Genetics, 2019 | 9 | 2019 |
| Immunogenomic profile at baseline predicts host susceptibility to clinical malaria G Mbambo, A Dwivedi, OO Ifeonu, JB Munro, B Shrestha, RE Bromley, ... Frontiers in Immunology 14, 1179314, 2023 | 4 | 2023 |
| in silico transcriptome dissection of neocortical excitatory neurogenesis via joint matrix decomposition and transfer learning S Sonthalia, G Li, XM Blanco, A Casella, J Liu, G Stein-O’Brien, B Caffo, ... bioRxiv, 2024 | | 2024 |
| A Curated Compendium of Transcriptomic Data for the Exploration of Neocortical Development S Sonthalia, RS Adkins, J Orvis, G Li, XM Blanco, A Casella, J Liu, ... bioRxiv, 2024 | | 2024 |
| Deciphering Bacterial and Archaeal Transcriptional Dark Matter and Its Architectural Complexity JSA Mattick, RE Bromley, KJ Watson, RS Adkins, CI Holt, JF Lebov, ... bioRxiv, 2024.04. 02.587803, 2024 | | 2024 |
| BOTUX: Bayesian-like operational taxonomic unit examiner VN Koparde, RS Adkins, JM Fettweis, MG Serrano, GA Buck, MA Reimers, ... International journal of computational biology and drug design 7 (2-3), 130-145, 2014 | | 2014 |
