Accessible high-throughput virtual screening molecular docking software for students and educators RB Jacob, T Andersen, OM McDougal PLoS computational biology 8 (5), e1002499, 2012 | 131 | 2012 |
Absent sequences: nullomers and primes G Hampikian, T Andersen Biocomputing 2007, 355-366, 2007 | 94 | 2007 |
Cross validation and MLP architecture selection T Andersen, T Martinez IJCNN'99. International Joint Conference on Neural Networks. Proceedings …, 1999 | 70 | 1999 |
Text degradations and OCR training EHB Smith, T Andersen Eighth International Conference on Document Analysis and Recognition (ICDAR …, 2005 | 65 | 2005 |
Shape homeostasis in virtual embryos T Andersen, R Newman, T Otter Artificial life 15 (2), 161-183, 2009 | 52 | 2009 |
An alternative approach to nucleic acid memory GD Dickinson, GM Mortuza, W Clay, L Piantanida, CM Green, C Watson, ... Nature communications 12 (1), 2371, 2021 | 51 | 2021 |
Handbook of financial time series A Patton, K Sheppard, T Andersen, R Davis, JP Kreiss, T Mikosch Part 5, 767-785, 2009 | 45 | 2009 |
System and method for creating a searchable word index of a scanned document including multiple interpretations of a word at a given document location TL Andersen, FA Zarndt, RB Wille, ME Rimer, MU Bailey, GB Millar, ... US Patent 7,240,062, 2007 | 38 | 2007 |
DockoMatic 2.0: high throughput inverse virtual screening and homology modeling C Bullock, N Cornia, R Jacob, A Remm, T Peavey, K Weekes, C Mallory, ... Journal of chemical information and modeling 53 (8), 2161-2170, 2013 | 37 | 2013 |
Dockomatic-automated ligand creation and docking CW Bullock, RB Jacob, OM McDougal, G Hampikian, T Andersen BMC Research Notes 3, 1-8, 2010 | 25 | 2010 |
DockoMatic: Automated peptide analog creation for high throughput virtual screening RB Jacob, CW Bullock, T Andersen, OM McDougal Journal of computational chemistry 32 (13), 2936-2941, 2011 | 21 | 2011 |
Features for neural net based region identification of newspaper documents T Andersen, W Zhang Seventh International Conference on Document Analysis and Recognition, 2003 …, 2003 | 20 | 2003 |
Systems and methods for cell-centric simulation of biological events and cell based-models produced therefrom RD Newman, TL Andersen, UA Eoff, MG Footen, JW Habig, T Otter, ... US Patent App. 12/554,870, 2010 | 18 | 2010 |
NP-completeness of minimum rule sets TL Andersen, TR Martinez Proceedings of the 10th international symposium on computer and information …, 1995 | 17 | 1995 |
A provably convergent dynamic training method for multi-layer perceptron networks TL Andersen, TR Martinez The Second International Symposium on Neuroinformatics and Neurocomputers, 77-84, 1995 | 16 | 1995 |
Extending page segmentation algorithms for mixed-layout document processing A Winder, T Andersen, EHB Smith 2011 International Conference on Document Analysis and Recognition, 1245-1249, 2011 | 15 | 2011 |
Genetic algorithm managed peptide mutant screening: optimizing peptide ligands for targeted receptor binding MD King, T Long, T Andersen, OM McDougal Journal of chemical information and modeling 56 (12), 2378-2387, 2016 | 14 | 2016 |
Safeguarding forensic DNA reference samples with nullomer barcodes J Goswami, MC Davis, T Andersen, A Alileche, G Hampikian Journal of forensic and legal medicine 20 (5), 513-519, 2013 | 14 | 2013 |
Method, system, and apparatus for virtual modeling of biological tissue with adaptive emergent functionality WL Crowley Jr, UA Eoff, CC Petschulat, ME Vail, RD Newman, ... US Patent 7,734,423, 2010 | 14 | 2010 |
SPIDR: small-molecule peptide-influenced drug repurposing OMMD Matthew D. King, Thomas Long, Daniel L. Pfalmer, Timothy L. Andersen BMC Bioinformatics 19 (138), 2018 | 13 | 2018 |