Altering the intestinal microbiota during a critical developmental window has lasting metabolic consequences LM Cox, S Yamanishi, J Sohn, AV Alekseyenko, JM Leung, I Cho, SG Kim, ... Cell 158 (4), 705-721, 2014 | 1897 | 2014 |
Antibiotics in early life alter the murine colonic microbiome and adiposity I Cho, S Yamanishi, L Cox, BA Methé, J Zavadil, K Li, Z Gao, D Mahana, ... Nature 488 (7413), 621-626, 2012 | 1786 | 2012 |
Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty G Baele, P Lemey, T Bedford, A Rambaut, MA Suchard, AV Alekseyenko Molecular biology and evolution 29 (9), 2157-2167, 2012 | 1136 | 2012 |
Mapping the origins and expansion of the Indo-European language family R Bouckaert, P Lemey, M Dunn, SJ Greenhill, AV Alekseyenko, ... Science 337 (6097), 957-960, 2012 | 812 | 2012 |
Human oral microbiome and prospective risk for pancreatic cancer: a population-based nested case-control study X Fan, AV Alekseyenko, J Wu, BA Peters, EJ Jacobs, SM Gapstur, ... Gut 67 (1), 120-127, 2018 | 721 | 2018 |
Cigarette smoking and the oral microbiome in a large study of American adults J Wu, BA Peters, C Dominianni, Y Zhang, Z Pei, L Yang, Y Ma, MP Purdue, ... The ISME journal 10 (10), 2435-2446, 2016 | 536 | 2016 |
Enrichment of lung microbiome with supraglottic taxa is associated with increased pulmonary inflammation LN Segal, AV Alekseyenko, JC Clemente, R Kulkarni, B Wu, H Chen, ... Microbiome 1, 1-12, 2013 | 429 | 2013 |
Community differentiation of the cutaneous microbiota in psoriasis AV Alekseyenko, GI Perez-Perez, A De Souza, B Strober, Z Gao, M Bihan, ... Microbiome 1, 1-17, 2013 | 398 | 2013 |
Metabolic and metagenomic outcomes from early-life pulsed antibiotic treatment YR Nobel, LM Cox, FF Kirigin, NA Bokulich, S Yamanishi, I Teitler, ... Nature communications 6 (1), 7486, 2015 | 377 | 2015 |
Antibiotic-mediated gut microbiome perturbation accelerates development of type 1 diabetes in mice AE Livanos, TU Greiner, P Vangay, W Pathmasiri, D Stewart, S McRitchie, ... Nature microbiology 1 (11), 1-13, 2016 | 350 | 2016 |
Lupus nephritis is linked to disease-activity associated expansions and immunity to a gut commensal D Azzouz, A Omarbekova, A Heguy, D Schwudke, N Gisch, BH Rovin, ... Annals of the rheumatic diseases 78 (7), 947-956, 2019 | 346 | 2019 |
Drinking alcohol is associated with variation in the human oral microbiome in a large study of American adults X Fan, BA Peters, EJ Jacobs, SM Gapstur, MP Purdue, ND Freedman, ... Microbiome 6, 1-15, 2018 | 214 | 2018 |
A comprehensive evaluation of multicategory classification methods for microbiomic data A Statnikov, M Henaff, V Narendra, K Konganti, Z Li, L Yang, Z Pei, ... Microbiome 1, 1-12, 2013 | 203 | 2013 |
Global analysis of exon creation versus loss and the role of alternative splicing in 17 vertebrate genomes AV Alekseyenko, N Kim, CJ Lee Rna 13 (5), 661-670, 2007 | 172 | 2007 |
Cutaneous microbiome effects of fluticasone propionate cream and adjunctive bleach baths in childhood atopic dermatitis ME Gonzalez, JV Schaffer, SJ Orlow, Z Gao, H Li, AV Alekseyenko, ... Journal of the American Academy of Dermatology 75 (3), 481-493. e8, 2016 | 171 | 2016 |
PERMANOVA-S: association test for microbial community composition that accommodates confounders and multiple distances ZZ Tang, G Chen, AV Alekseyenko Bioinformatics 32 (17), 2618-2625, 2016 | 142 | 2016 |
The ASAP II database: analysis and comparative genomics of alternative splicing in 15 animal species N Kim, AV Alekseyenko, M Roy, C Lee Nucleic Acids Research 35 (suppl_1), D93-D98, 2007 | 135 | 2007 |
The RAG2 C terminus suppresses genomic instability and lymphomagenesis L Deriano, J Chaumeil, M Coussens, A Multani, YF Chou, ... Nature 471 (7336), 119-123, 2011 | 118 | 2011 |
Quantitation and composition of cutaneous microbiota in diabetic and nondiabetic men H Redel, Z Gao, H Li, AV Alekseyenko, Y Zhou, GI Perez-Perez, ... The Journal of infectious diseases 207 (7), 1105-1114, 2013 | 116 | 2013 |
Evidence for a subpopulation of conserved alternative splicing events under selection pressure for protein reading frame preservation A Resch, Y Xing, A Alekseyenko, B Modrek, C Lee Nucleic acids research 32 (4), 1261-1269, 2004 | 111 | 2004 |