DNA–DNA interactions in bacteriophage capsids are responsible for the observed DNA knotting D Marenduzzo, E Orlandini, A Stasiak, L Tubiana, C Micheletti Proceedings of the National Academy of Sciences 106 (52), 22269-22274, 2009 | 221 | 2009 |
Probing the entanglement and locating knots in ring polymers: a comparative study of different arc closure schemes L Tubiana, E Orlandini, C Micheletti Arxiv preprint arXiv:1103.0475, 2011 | 149 | 2011 |
Spontaneous knotting and unknotting of flexible linear polymers: Equilibrium and kinetic aspects L Tubiana, A Rosa, F Fragiacomo, C Micheletti Macromolecules 46 (9), 3669-3678, 2013 | 91 | 2013 |
Multiscale entanglement in ring polymers under spherical confinement L Tubiana, E Orlandini, C Micheletti Physical Review Letters 107 (18), 188302, 2011 | 66 | 2011 |
KymoKnot: A web server and software package to identify and locate knots in trajectories of linear or circular polymers L Tubiana, G Polles, E Orlandini, C Micheletti The European physical journal E 41, 1-7, 2018 | 62 | 2018 |
Structure and dynamics of ring polymers: entanglement effects because of solution density and ring topology A Rosa, E Orlandini, L Tubiana, C Micheletti Macromolecules, 2011 | 54 | 2011 |
Synonymous mutations reduce genome compactness in icosahedral ssRNA viruses L Tubiana, AL Božič, C Micheletti, R Podgornik Biophysical journal 108 (1), 194-202, 2015 | 48 | 2015 |
Driving knots on DNA with AC/DC electric fields: topological friction and memory effects M Di Stefano, L Tubiana, M Di Ventra, C Micheletti Soft Matter 10 (34), 6491-6498, 2014 | 39 | 2014 |
The role of directional interactions in the designability of generalized heteropolymers C Cardelli, V Bianco, L Rovigatti, F Nerattini, L Tubiana, C Dellago, ... Scientific reports 7 (1), 4986, 2017 | 27 | 2017 |
Single-molecule structure and topology of kinetoplast DNA networks P He, AJ Katan, L Tubiana, C Dekker, D Michieletto Physical Review X 13 (2), 021010, 2023 | 17 | 2023 |
Role of bending energy and knot chirality in knot distribution and their effective interaction along stretched semiflexible polymers S Najafi, R Podgornik, R Potestio, L Tubiana Polymers 8 (10), 347, 2016 | 16 | 2016 |
Chirality modifies the interaction between knots S Najafi, L Tubiana, R Podgornik, R Potestio Europhysics Letters 114 (5), 50007, 2016 | 16 | 2016 |
Hydrodynamic of active liquid crystals: A hybrid lattice boltzmann approach E Orlandini, ME Cates, D Marenduzzo, L Tubiana, JM Yeomans Molecular Crystals and Liquid Crystals 494 (1), 293-308, 2008 | 15 | 2008 |
Circular polycatenanes: Supramolecular structures with topologically tunable properties L Tubiana, F Ferrari, E Orlandini Physical Review Letters 129 (22), 227801, 2022 | 14 | 2022 |
Computational study on the progressive factorization of composite polymer knots into separated prime components L Tubiana Physical Review E 89 (5), 052602, 2014 | 14 | 2014 |
Compactness of viral genomes: effect of disperse and localized random mutations AL Božič, C Micheletti, R Podgornik, L Tubiana Journal of Physics: Condensed Matter 30 (8), 084006, 2018 | 12 | 2018 |
Comparing equilibration schemes of high-molecular-weight polymer melts with topological indicators L Tubiana, H Kobayashi, R Potestio, B Dünweg, K Kremer, P Virnau, ... Journal of Physics: Condensed Matter 33 (20), 204003, 2021 | 11 | 2021 |
Heteropolymer design and folding of arbitrary topologies reveals an unexpected role of alphabet size on the knot population C Cardelli, L Tubiana, V Bianco, F Nerattini, C Dellago, I Coluzza Macromolecules 51 (21), 8346-8356, 2018 | 11 | 2018 |
General methodology to identify the minimum alphabet size for heteropolymer design C Cardelli, F Nerattini, L Tubiana, V Bianco, C Dellago, F Sciortino, ... Advanced Theory and Simulations 2 (7), 1900031, 2019 | 9 | 2019 |
Design of protein–protein binding sites suggests a rationale for naturally occurring contact areas F Nerattini, L Tubiana, C Cardelli, V Bianco, C Dellago, I Coluzza Journal of Chemical Theory and Computation 15 (2), 1383-1392, 2018 | 7 | 2018 |