IAMPE: NMR-assisted computational prediction of antimicrobial peptides K Kavousi, M Bagheri, S Behrouzi, S Vafadar, FF Atanaki, BT Lotfabadi, ... Journal of Chemical Information and Modeling 60 (10), 4691-4701, 2020 | 67 | 2020 |
BIPEP: Sequence-based prediction of biofilm inhibitory peptides using a combination of nmr and physicochemical descriptors F Fallah Atanaki, S Behrouzi, S Ariaeenejad, A Boroomand, K Kavousi ACS omega 5 (13), 7290-7297, 2020 | 42 | 2020 |
Functional map of SARS-CoV-2 3CL protease reveals tolerant and immutable sites S Iketani, SJ Hong, J Sheng, F Bahari, B Culbertson, FF Atanaki, ... Cell Host & Microbe 30 (10), 1354-1362. e6, 2022 | 33 | 2022 |
Co-abundance analysis reveals hidden players associated with high methane yield phenotype in sheep rumen microbiome L Ghanbari Maman, F Palizban, F Fallah Atanaki, N Elmi Ghiasi, ... Scientific Reports 10 (1), 4995, 2020 | 29 | 2020 |
miR-548x and miR-4698 controlled cell proliferation by affecting the PI3K/AKT signaling pathway in Glioblastoma cell lines MR Kalhori, E Arefian, F Fallah Atanaki, K Kavousi, M Soleimani Scientific reports 10 (1), 1558, 2020 | 27 | 2020 |
CpACpP: In Silico Cell-Penetrating Anticancer Peptide Prediction Using a Novel Bioinformatics Framework F Nasiri, FF Atanaki, S Behrouzi, K Kavousi, M Bagheri ACS omega 6 (30), 19846-19859, 2021 | 25 | 2021 |
MCIC: automated identification of cellulases from metagenomic data and characterization based on temperature and pH dependence M Foroozandeh Shahraki, S Ariaeenejad, F Fallah Atanaki, B Zolfaghari, ... Frontiers in Microbiology 11, 567863, 2020 | 22 | 2020 |
A computational learning paradigm to targeted discovery of biocatalysts from metagenomic data: A case study of lipase identification MF Shahraki, FF Atanaki, S Ariaeenejad, MR Ghaffari, ... Biotechnology and Bioengineering 119 (4), 1115-1128, 2022 | 18 | 2022 |
The miR-142 suppresses U-87 glioblastoma cell growth by targeting EGFR oncogenic signaling pathway F Gheidari, E Arefian, FJ Adegani, FF Atanaki, M Soleimani Iranian Journal of Pharmaceutical Research: IJPR 20 (4), 202, 2021 | 7 | 2021 |
The functional landscape of SARS-CoV-2 3CL protease S Iketani, SJ Hong, J Sheng, F Bahari, B Culbertson, FF Atanaki, ... BioRxiv, 2022.06. 23.497404, 2022 | 5 | 2022 |
Precision enzyme discovery through targeted mining of metagenomic data S Ariaeenejad, J Gharechahi, M Foroozandeh Shahraki, F Fallah Atanaki, ... Natural Products and Bioprospecting 14 (1), 7, 2024 | 3 | 2024 |