Quantifying the similarity of topological domains across normal and cancer human cell types N Sauerwald, C Kingsford Bioinformatics 34 (13), i475-i483, 2018 | 46 | 2018 |
Analysis of the structural variability of topologically associated domains as revealed by Hi-C N Sauerwald, A Singhal, C Kingsford NAR genomics and bioinformatics 2 (1), lqz008, 2020 | 37 | 2020 |
Asymptomatic SARS-CoV-2 infection is associated with higher levels of serum IL-17C, matrix metalloproteinase 10 and fibroblast growth factors than mild symptomatic COVID-19 A Soares-Schanoski, N Sauerwald, CW Goforth, S Periasamy, DL Weir, ... Frontiers in Immunology 13, 821730, 2022 | 36 | 2022 |
Chromosomal dynamics predicted by an elastic network model explains genome-wide accessibility and long-range couplings N Sauerwald, S Zhang, C Kingsford, I Bahar Nucleic acids research 45 (7), 3663-3673, 2017 | 29 | 2017 |
Pre-infection antiviral innate immunity contributes to sex differences in SARS-CoV-2 infection N Sauerwald, Z Zhang, I Ramos, VD Nair, A Soares-Schanoski, Y Ge, ... Cell Systems 13 (11), 924-931. e4, 2022 | 9 | 2022 |
dNEMO: a tool for quantification of mRNA and punctate structures in time-lapse images of single cells GJ Kowalczyk, JA Cruz, Y Guo, Q Zhang, N Sauerwald, REC Lee bioRxiv, 855213, 2019 | 8 | 2019 |
Topological data analysis reveals principles of chromosome structure throughout cellular differentiation N Sauerwald, Y Shen, C Kingsford bioRxiv, 540716, 2019 | 5 | 2019 |
Blood RNA alternative splicing events as diagnostic biomarkers for infectious disease Z Zhang, N Sauerwald, A Cappuccio, I Ramos, VD Nair, G Nudelman, ... Cell Reports Methods 3 (2), 2023 | 4 | 2023 |
Topological data analysis reveals principles of chromosome structure in cellular differentiation N Sauerwald, Y Shen, C Kingsford 19th International Workshop on Algorithms in Bioinformatics (WABI 2019), 2019 | 4 | 2019 |
Capturing the complexity of topologically associating domains through multi-feature optimization N Sauerwald, C Kingsford bioRxiv, 2021.01. 04.425264, 2021 | 3 | 2021 |
Decomposition of phenotypic heterogeneity in autism reveals distinct and coherent genetic programs A Litman, N Sauerwald, LAG Snyder, J Foss-Feig, CY Park, Y Hao, ... medRxiv, 2024 | | 2024 |
Algorithms for the study of chromosomal structure variability N Sauerwald | | 2020 |
A statistical nonparametric method for identifying consistently important features across samples N Sauerwald, C Kingsford bioRxiv, 833624, 2019 | | 2019 |
Theses by Author A ALAVI, S BANG, TE BUCK, SA CHOWDHURY, LP COELHO, ... | | |
AHMED, Amr CMU-CB-09-101 ALAVI, Amir CMU-CB-21-102 ARNOLD, Andrew CMU-CB-09-101 BANG, Seojin CMU-CB-20-100 TE BUCK, SA CHOWDHURY, LP COELHO, W COHEN, RE CURTIS, ... | | |
CMU-CB-20-102 Algorithms for the study of chromosomal structure variability N Sauerwald | | |
Supplementary Information for “Analysis of the structural variability of topologically associated domains as revealed by Hi-C” N Sauerwald, A Singhal, C Kingsford | | |