A 19-isolate reference-quality global pangenome for the fungal wheat pathogen Zymoseptoria tritici T Badet, U Oggenfuss, L Abraham, BA McDonald, D Croll BMC biology 18, 1-18, 2020 | 104 | 2020 |
A population-level invasion by transposable elements triggers genome expansion in a fungal pathogen U Oggenfuss, T Badet, T Wicker, FE Hartmann, NK Singh, L Abraham, ... Elife 10, e69249, 2021 | 47 | 2021 |
Rapid sequence evolution driven by transposable elements at a virulence locus in a fungal wheat pathogen NK Singh, T Badet, L Abraham, D Croll BMC genomics 22 (1), 393, 2021 | 20 | 2021 |
Optimization of parameters to improve transformation efficiency of elephant foot yam (Amorphophallus paeoniifolius (Dennst.) Nicolson LN Abraham, S Kamala, J Sreekumar, T Makeshkumar 3 Biotech 11 (6), 272, 2021 | 8 | 2021 |
Genome-wide association mapping reveals genes underlying population-level metabolome diversity in a fungal crop pathogen NK Singh, SM Tralamazza, LN Abraham, G Glauser, D Croll BMC biology 20 (1), 224, 2022 | 6 | 2022 |
Histone H3K27 methylation perturbs transcriptional robustness and underpins dispensability of highly conserved genes in fungi SM Tralamazza, LN Abraham, B Corrêa, D Croll Molecular Biology and Evolution, 2021 | 5* | 2021 |
Improved gene annotation of the fungal wheat pathogen Zymoseptoria tritici based on combined Iso-Seq and RNA-Seq evidence N Lapalu, L Lamothe, Y Petit, A Genissel, C Delude, A Feurtey, ... bioRxiv, 2023.04. 26.537486, 2023 | 3 | 2023 |
Population-level transposable element expression dynamics influence trait evolution in a fungal crop pathogen LN Abraham, U Oggenfuss, D Croll Mbio, e02840-23, 2024 | 1 | 2024 |
Genome-wide expression QTL mapping reveals the highly dynamic regulatory landscape of a major wheat pathogen LN Abraham, D Croll BMC biology, 2023 | 1 | 2023 |
Genome Evolution in Fungal Plant Pathogens: From Populations to Kingdom-Wide Dynamics U Oggenfuss, A Feurtey, CS Reyes-Avila, E Gluck-Thaler, G Puccetti, ... Evolution of Fungi and Fungal-Like Organisms, 103-121, 2023 | | 2023 |
Genome Evolution in Fungal Plant Pathogens: From Populations U Oggenfuss, A Feurtey, CS Reyes-Avila, E Gluck-Thaler, G Puccetti, ... Evolution of Fungi and Fungal-Like Organisms, 103, 0 | | |